RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SLC35A2	P78381	396 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PWP1	Q13610	501 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KCNC3	Q14003	757 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ABRAXAS2	Q15018	415 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NDUFA5	Q16718	116 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CLPP	Q16740	277 aa	Predicted RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTPRN	Q16849	979 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF404	Q494X3	552 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	XKR7	Q5GH72	579 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TPRG1L	Q5T0D9	272 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NXNL2	Q5VZ03	156 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DPY19L3	Q6ZPD9	716 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HORMAD1	Q86X24	394 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM217A	Q8IXS0	508 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PARP16	Q8N5Y8	322 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR5K1	Q8NHB7	308 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EEF1AKMT1	Q8WVE0	214 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FATE1	Q969F0	183 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KIAA1191	Q96A73	305 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NUS1	Q96E22	293 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IMP4	Q96G21	291 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		Q96MT0	163 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TTYH2	Q9BSA4	534 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BEX2	Q9BXY8	128 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BRINP2	Q9C0B6	783 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TFB2M	Q9H5Q4	396 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CPNE5	Q9HCH3	593 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ERVK13-1	Q9NX77	482 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC25A37	Q9NYZ2	338 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TPRKB	Q9Y3C4	175 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANGPTL3	Q9Y5C1	460 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCDHGA2	Q9Y5H1	932 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		A0A1W2PP55	124 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MROH6	A6NGR9	719 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AGAP5	A6NIR3	686 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GUCA1C	O95843	209 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VIP	P01282	170 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TNF	P01375	233 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GRK5	P34947	590 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RABIF	P47224	123 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DAP	P51397	102 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NUDT6	P53370	316 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CRISP3	P54108	245 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MAPKAPK3	Q16644	382 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM209A	Q5JX71	171 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SNAP47	Q5SQN1	464 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RD3	Q7Z3Z2	195 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MSRB3	Q8IXL7	192 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NRSN1	Q8IZ57	195 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	APCDD1	Q8J025	514 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PGBD5	Q8N414	524 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SVOP	Q8N4V2	548 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DENND6B	Q8NEG7	585 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR6K2	Q8NGY2	324 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR4L1	Q8NH43	312 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CHFR	Q96EP1	664 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AHCYL2	Q96HN2	611 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AARSD1	Q9BTE6	412 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GSDMC	Q9BYG8	508 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ROGDI	Q9GZN7	287 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	WDR26	Q9H7D7	661 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PARVB	Q9HBI1	364 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BPIFA1	Q9NP55	256 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FARSB	Q9NSD9	589 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CATSPERZ	Q9NTU4	200 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZIM2	Q9NZV7	527 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ABCG2	Q9UNQ0	655 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MED16	Q9Y2X0	877 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NEUROG3	Q9Y4Z2	214 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TDRD15	B5MCY1	1934 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCRL2	O00421	344 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TFEC	O14948	347 aa	Predicted RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NARS	O43776	548 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LEFTY1	O75610	366 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CREG1	O75629	220 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPS17	P08708	135 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HNRNPA2B1	P22626	353 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KRT20	P35900	424 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OPRD1	P41143	372 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GDF5	P43026	501 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TTPA	P49638	278 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPR33	Q49SQ1	333 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCDC58	Q4VC31	144 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYT6	Q5T7P8	510 aa	Predicted RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KIAA0895L	Q68EN5	471 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NADSYN1	Q6IA69	706 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GKN2	Q86XP6	184 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KLHDC8B	Q8IXV7	354 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DEPDC4	Q8N2C3	294 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR56A4	Q8NGH8	313 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TSPEAR	Q8WU66	669 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC13A3	Q8WWT9	602 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TMEM159	Q96B96	161 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NEDD4L	Q96PU5	975 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	COPS8	Q99627	209 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KCNS3	Q9BQ31	491 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CHCHD6	Q9BRQ6	235 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZSCAN5A	Q9BUG6	496 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms