RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SCUBE1Q8IWY4 988 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 RIMKLAQ8IXN7 391 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 FAM13CQ8NE31 585 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 STARD8Q92502 1023 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PIGKQ92643 395 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ZUFSPQ96AP4 578 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 VPS33AQ96AX1 596 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 CENPKQ9BS16 269 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 MAP10Q9P2G4 905 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 MCM8Q9UJA3 840 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 AP1M2Q9Y6Q5 423 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ASPMQ8IZT6 3477 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PCDH15Q96QU1 1955 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 A0A0J9YY10 115 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PPM1DO15297 605 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ANXA4P09525 319 aaPredicted RBP13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 MAGP20916 626 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ARFIP1P53367 373 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PSME3P61289 254 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 RPS15AP62244 130 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 FOXM1Q08050 763 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ZNF763Q0D2J5 394 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 SHBQ15464 509 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 C6orf132Q5T0Z8 1188 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 FBXW10Q5XX13 1052 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PGM2L1Q6PCE3 622 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 RABEPKQ7Z6M1 372 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ZNF761Q86XN6 746 aaPredicted RBP13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 DPP10Q8N608 796 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 KRTCAP2Q8N6L1 136 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 TRPV3Q8NET8 790 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 CLHC1Q8NHS4 586 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 HOPXQ9BPY8 73 aaPredicted RBP13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 CROTQ9UKG9 612 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 ANGPTL2Q9UKU9 493 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PCDHGA7Q9Y5G6 932 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 PCDHGA4Q9Y5G9 962 aa13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-216ENST00000540755 SAP18O00422 153 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 PLPP1O14494 284 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 NDUFS4O43181 175 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 UBXN7O94888 489 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 NPPAP01160 153 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 PGRP06401 933 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 NOVA1P51513 510 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 EPHA4P54764 986 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 MTTPP55157 894 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 BNIP3Q12983 259 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 BIRC2Q13490 618 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 TRMT5Q32P41 509 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 ADPRMQ3LIE5 342 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 FAM174BQ3ZCQ3 159 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 TMEM35AQ53FP2 167 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 SPANXN4Q5MJ08 99 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 ARMC6Q6NXE6 501 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 FIGLAQ6QHK4 219 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 MSANTD1Q6ZTZ1 278 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 PAGE2Q7Z2X7 111 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 SLC25A45Q8N413 288 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 MINDY1Q8N5J2 469 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 WDR48Q8TAF3 677 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 SLC13A3Q8WWT9 602 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 RSC1A1Q92681 617 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 THAP11Q96EK4 314 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 EGLN2Q96KS0 407 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 SLC38A3Q99624 504 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 GPATCH1Q9BRR8 931 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 ZNF717Q9BY31 904 aaPredicted RBP13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 TMEM9BQ9NQ34 198 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 ADAM29Q9UKF5 820 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 POMT2Q9UKY4 750 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 KLHL20Q9Y2M5 609 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
CYB561A3-216ENST00000540755 A0A1B0GTQ1 180 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 GNG14A0A1W2PPG7 69 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 LRIT2A6NDA9 550 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 FXYD1O00168 92 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 YKT6O15498 198 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 GIMD1P0DJR0 217 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 HOXB3P14651 431 aaPredicted RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 EPHA8P29322 1005 aaPredicted RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 HNRNPH1P31943 449 aaKnown RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 S100A3P33764 101 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 BSGP35613 385 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 GSTM5P46439 218 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 CAPZBP47756 277 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 DGKQP52824 942 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 SRSF11Q05519 484 aaKnown RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 HYAL2Q12891 473 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 NFYCQ13952 458 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 ST3GAL2Q16842 350 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 DUOXA1Q1HG43 343 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 TRIM61Q5EBN2 209 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms