RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PTX3P26022 381 aaPredicted RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GABRR2P28476 465 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TGFBR2P37173 567 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PIGAP37287 484 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TRPC1P48995 793 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ALDH9A1P49189 494 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GZMMP51124 257 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PGGT1BP53609 377 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 MAP3K7CLP57077 242 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TBX4P57082 545 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GNG2P59768 71 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 COPZ1P61923 177 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 YBX1P67809 324 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 IL5RAQ01344 420 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CYP4F3Q08477 520 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ABHD18Q0P651 414 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SRSF5Q13243 272 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 RUNX3Q13761 415 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 E2F2Q14209 437 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 MAD2L1BPQ15013 274 aaPredicted RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PDGFRLQ15198 375 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SF3A2Q15428 464 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TBCEQ15813 527 aaPredicted RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TIMM50Q3ZCQ8 353 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PLK5Q496M5 336 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 LDLRAP1Q5SW96 308 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 LRIF1Q5T3J3 769 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 MARC1Q5VT66 337 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 STEAP3Q658P3 488 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CPZQ66K79 652 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CYP20A1Q6UW02 462 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GDPGP1Q6ZNW5 385 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 RPS27LQ71UM5 84 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GDPD3Q7L5L3 318 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 B3GNT8Q7Z7M8 397 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PDZD3Q86UT5 571 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 UBQLNLQ8IYU4 475 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CHPFQ8IZ52 775 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CPA6Q8N4T0 437 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 FNDC5Q8NAU1 212 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ATAD1Q8NBU5 361 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 NETO2Q8NC67 525 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ZMIZ2Q8NF64 920 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 OR52K2Q8NGK3 314 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 OR6F1Q8NGZ6 308 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 OR4L1Q8NH43 312 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 C9orf43Q8TAL5 461 aaPredicted RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 BLOC1S5Q8TDH9 187 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GTF2H4Q92759 462 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 FUBP1Q96AE4 644 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TMCO6Q96DC7 493 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SMARCD1Q96GM5 515 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CELF6Q96J87 481 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 C19orf43Q9BQ61 176 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 NDEL1Q9GZM8 345 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ADAM19Q9H013 955 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 RACGAP1Q9H0H5 632 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 C3orf14Q9HBI5 128 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CRTAC1Q9NQ79 661 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ABCC13Q9NSE7 274 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 FKBP14Q9NWM8 211 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 C1orf109Q9NX04 203 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 QPCTLQ9NXS2 382 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 NUDT4Q9NZJ9 180 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 COX16Q9P0S2 106 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SLAMF8Q9P0V8 285 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF221Q9UK13 617 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SAMD4AQ9UPU9 718 aaKnown RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SATB2Q9UPW6 733 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 WASF3Q9UPY6 502 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CARD8Q9Y2G2 431 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PCDHGA3Q9Y5H0 932 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ZZEF1O43149 2961 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 FRYQ5TBA9 3013 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 A0A096LPI6 279 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CENPXA8MT69 81 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SUPT3HB4E1H0 165 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 PSMD11O00231 422 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 PPP6CO00743 305 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 LCE2BO14633 110 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SEC14L5O43304 696 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 AIREO43918 545 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 HTR3BO95264 441 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CCNDBP1O95273 360 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 SIX3O95343 332 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 APBB3O95704 486 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 MT-CO1P00395 513 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 MT-ND2P03891 347 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 MMP2P08253 660 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ATXN1LP0C7T5 689 aaKnown RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 ITGA2P17301 1181 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 TCEA1P23193 301 aaKnown RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 IGFBP5P24593 272 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 NUDT1P36639 197 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 PIK3CBP42338 1070 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CTSKP43235 329 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 HTR3AP46098 478 aa7.38□□□□□ -1.23
CCDC60-204ENST00000539847 CLK1P49759 484 aaKnown RBP7.38□□□□□ -1.23
CCDC60-204ENST00000539847 STC1P52823 247 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms