RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 EYSQ5T1H1 3165 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 LRP4O75096 1905 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
VTN-202ENST00000539746 LRIT2A6NDA9 550 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 HAT1O14929 419 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 PPM1DO15297 605 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 TBX19O60806 448 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 ERN1O75460 977 aaKnown RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 KCNH1O95259 989 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 C9P02748 559 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 COX7A2P14406 83 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 TYRP1P17643 537 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 CD22P20273 847 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 GPX3P22352 226 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 PSMB5P28074 263 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 HTR6P50406 440 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 NEK2P51955 445 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 MAPK10P53779 464 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 FAM53BQ14153 422 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 MAPKAPK3Q16644 382 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 ZXDCQ2QGD7 858 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 MUM1Q2TAK8 710 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 AASDHQ4L235 1098 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 RFTN2Q52LD8 501 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 CPTPQ5TA50 214 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 CAMKMTQ7Z624 323 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 C1orf52Q8N6N3 182 aaKnown RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 CSNK1A1LQ8N752 337 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 ATOH1Q92858 354 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 CCDC74AQ96AQ1 378 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 PPCDCQ96CD2 204 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 MOCOSQ96EN8 888 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 C3orf30Q96M34 536 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 TGM7Q96PF1 710 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 FCRL4Q96PJ5 515 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 TRAPPC9Q96Q05 1148 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 GFM1Q96RP9 751 aaKnown RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 TBC1D10AQ9BXI6 508 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 TRIM15Q9C019 465 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 BHLHE41Q9C0J9 482 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 STRADBQ9C0K7 418 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 SLC6A16Q9GZN6 736 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 LYRM4Q9HD34 91 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 NEUROD4Q9HD90 331 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 SLC6A20Q9NP91 592 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 ACSS2Q9NR19 701 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 CUEDC1Q9NWM3 386 aaPredicted RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 THUMPD1Q9NXG2 353 aaKnown RBP11.26□□□□□ -0.61
VTN-202ENST00000539746 SEMA5BQ9P283 1151 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 THADAQ6YHU6 1953 aa11.26□□□□□ -0.61
VTN-202ENST00000539746 C1orf226A1L170 272 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 CPED1A4D0V7 1026 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 B2RBV5 119 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 NR5A2O00482 541 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 MRASO14807 208 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 ERI3O43414 337 aaKnown RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 SIGLEC6O43699 453 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 DYRK3O43781 588 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 EEDO75530 441 aaKnown RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 DNAJC8O75937 253 aaPredicted RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 SCELO95171 688 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 SLC34A2O95436 690 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 TGFB1P01137 390 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 G6PDP11413 515 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 ALOX12P18054 663 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 HIST1H1TP22492 207 aaPredicted RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 ACP1P24666 158 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 NTSP30990 170 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 BCL6P41182 706 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 TRPC1P48995 793 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 ACTN3Q08043 901 aaPredicted RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
VTN-202ENST00000539746 BNIP3Q12983 259 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 UBAP2LQ14157 1087 aaKnown RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 SPIDRQ14159 915 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 ZIC1Q15915 447 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 TOR1AIP1Q5JTV8 583 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 KANSL1Q7Z3B3 1105 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 SNX32Q86XE0 403 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 EID2Q8N6I1 236 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 OR8J2Q8NGG1 315 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 RHBDD1Q8TEB9 315 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 PATE1Q8WXA2 126 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 MOAP1Q96BY2 351 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 ZBED6CLQ96FA7 236 aaPredicted RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 CNDP2Q96KP4 475 aaKnown RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 OR2A5Q96R48 311 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 NDC1Q9BTX1 674 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 C1orf50Q9BV19 199 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 SPATA9Q9BWV2 254 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 SLC7A5P2Q9GIP4 190 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 RASSF4Q9H2L5 321 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 MUC13Q9H3R2 512 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 ZNF768Q9H5H4 540 aaKnown RBP11.25□□□□□ -0.61
VTN-202ENST00000539746 CLMPQ9H6B4 373 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 REEP4Q9H6H4 257 aa11.25□□□□□ -0.61
VTN-202ENST00000539746 TNFRSF12AQ9NP84 129 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms