RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SLC5A11Q8WWX8 675 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 BHLHE41Q9C0J9 482 aaPredicted RBP14.05□□□□□ -0.16
CACNB1-206ENST00000539338 COMMD4Q9H0A8 199 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 PTBP2Q9UKA9 531 aaKnown RBP14.05□□□□□ -0.16
CACNB1-206ENST00000539338 SMIM30A4D0T7 59 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 PSMD9O00233 223 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 ARSDP51689 593 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 KIAA1614Q5VZ46 1190 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 RASSF6Q6ZTQ3 369 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 SLC22A16Q86VW1 577 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 CHIAQ9BZP6 476 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 PIGUQ9H490 435 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 CDC14AQ9UNH5 594 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 HMGB3O15347 200 aaKnown RBP14.05□□□□□ -0.16
CACNB1-206ENST00000539338 XPNPEP2O43895 674 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 HLA-EP13747 358 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 RBBP4Q09028 425 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 LPAL2Q16609 132 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 PSAPL1Q6NUJ1 521 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 GALNTL5Q7Z4T8 443 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 SMPDL3AQ92484 453 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 TMED9Q9BVK6 235 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 KCNK6Q9Y257 313 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 DLGAP4Q9Y2H0 992 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 VEGFDO43915 354 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 RHOP08100 348 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 SLC2A2P11168 524 aaPredicted RBP14.05□□□□□ -0.16
CACNB1-206ENST00000539338 ENTPD1P49961 510 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 ALKBH2Q6NS38 261 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 PREBQ9HCU5 417 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 MYH7P12883 1935 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 ZNF879B4DU55 563 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 LINGO3P0C6S8 592 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 EDNRBP24530 442 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 DCDC1P59894 354 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 KCNAB2Q13303 367 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 SHHQ15465 462 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 TMEM44Q2T9K0 475 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 ARL9Q6T311 187 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 CNIH3Q8TBE1 160 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 RAB8BQ92930 207 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 ISOC1Q96CN7 298 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 DNAJC27Q9NZQ0 273 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 TBC1D24Q9ULP9 559 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 FKBP7Q9Y680 259 aa14.05□□□□□ -0.16
CACNB1-206ENST00000539338 LEFTY2O00292 366 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 PRODHO43272 600 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 CTSAP10619 480 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 PTNP21246 168 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ATP6AP1Q15904 470 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 LRRC26Q2I0M4 334 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 AMZ1Q400G9 498 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 TMEM126BQ8IUX1 230 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 SLC15A3Q8IY34 581 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 PSKH2Q96QS6 385 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 MAPKAP1Q9BPZ7 522 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 MKKSQ9NPJ1 570 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 MID1O15344 667 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 HMGN1P05114 100 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 MASP1P48740 699 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 STK19P49842 368 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 CLCN7P51798 805 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 CLDN10P78369 228 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 DNASE1L3Q13609 305 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 SMCO1Q147U7 214 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ELOCQ15369 112 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 TOR1AIP1Q5JTV8 583 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 LY6G5CQ5SRR4 150 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ZNF648Q5T619 568 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ZNF613Q6PF04 617 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 EFHD2Q96C19 240 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 TAPBPLQ9BX59 468 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 GPR62Q9BZJ7 368 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 SLC22A4Q9H015 551 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 PAK6Q9NQU5 681 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 TNFRSF10DQ9UBN6 386 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 IGKV6-21A0A0C4DH24 114 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 MEIS3P2A8K0S8 358 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 HOXA11P31270 313 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 HOXC12P31275 282 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ACADVLP49748 655 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 PNPLA1Q8N8W4 532 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 CCM2LQ9NUG4 571 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 RNF6Q9Y252 685 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 GLOD5A6NK44 160 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 SNNO75324 88 aaPredicted RBP14.04□□□□□ -0.16
CACNB1-206ENST00000539338 PDYNP01213 254 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 NDUFS1P28331 727 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 GRIA2P42262 883 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 SMSP52788 366 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 C7orf57Q8NEG2 295 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 FBXO27Q8NI29 283 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 RHEBL1Q8TAI7 183 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ZSWIM3Q96MP5 696 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 ZNF224Q9NZL3 707 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 CYP8B1Q9UNU6 501 aa14.04□□□□□ -0.16
CACNB1-206ENST00000539338 CPNE3O75131 537 aaKnown RBP14.03□□□□□ -0.16
CACNB1-206ENST00000539338 OAS1P00973 400 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms