RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CREB3L4Q8TEY5 395 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 THAP11Q96EK4 314 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 TCTN2Q96GX1 697 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 F2RL3Q96RI0 385 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 GFM1Q96RP9 751 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 SYNPO2LQ9H987 977 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 FAM60AQ9NP50 221 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 PDE7BQ9NP56 450 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 NOP53Q9NZM5 478 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 EIF3LQ9Y262 564 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 NEUROG3Q9Y4Z2 214 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 COPG1Q9Y678 874 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 CAPN7Q9Y6W3 813 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 SMG1Q96Q15 3661 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 A0A0G2JN53 185 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 H0YGG7 62 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 PCDH7O60245 1069 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SPINK2P20155 84 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 PRPH2P23942 346 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 ACP1P24666 158 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 PTX3P26022 381 aaPredicted RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 HNRNPH1P31943 449 aaKnown RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 ARF3P61204 181 aaPredicted RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 SPIDRQ14159 915 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SPIN4Q56A73 249 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 PHF19Q5T6S3 580 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 METTL21CQ5VZV1 264 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 FBXO42Q6P3S6 717 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 TMEM71Q6P5X7 295 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 WDR74Q6RFH5 385 aaPredicted RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 DBX2Q6ZNG2 339 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 CHSY3Q70JA7 882 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 VN1R4Q7Z5H5 301 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 LIX1Q8N485 282 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 ZNF655Q8N720 491 aaPredicted RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 CSNK1A1LQ8N752 337 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SLC13A3Q8WWT9 602 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SLC45A3Q96JT2 553 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 CCDC74BQ96LY2 380 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SARGQ9BW04 601 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SORBS1Q9BX66 1292 aaKnown RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 NLNQ9BYT8 704 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 SAR1AQ9NR31 198 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 AIG1Q9NVV5 245 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 PILRAQ9UKJ1 303 aa13.49□□□□□ -0.25
CD4-208ENST00000538827 RUVBL1Q9Y265 456 aaKnown RBP13.49□□□□□ -0.25
CD4-208ENST00000538827 AKAP13Q12802 2813 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 WDFY3Q8IZQ1 3526 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 LOC105369274A0A096LPK9 316 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 LOC102723532A0A0G2JNH3 316 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 D6RAR5 112 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 RTCAO00442 366 aaKnown RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 EBAG9O00559 213 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 ERI3O43414 337 aaKnown RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 SEMA3DO95025 777 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 IDO1P14902 403 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 CSRP1P21291 193 aaKnown RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 TIA1P31483 386 aaKnown RBP eCLIP13.48□□□□□ -0.25
CD4-208ENST00000538827 SSR2P43308 183 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 ACADVLP49748 655 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 PLA2G16P53816 162 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 DIO3P55073 304 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 STXBP1P61764 594 aaKnown RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 EMX2Q04743 252 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 CUL3Q13618 768 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 KCNAB1Q14722 419 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 RFTN2Q52LD8 501 aaPredicted RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 TMTC4Q5T4D3 741 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 FOXR1Q6PIV2 292 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 COMMD6Q7Z4G1 85 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 CLNKQ7Z7G1 428 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 MCATQ8IVS2 390 aaKnown RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 OR4N4Q8N0Y3 316 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 CARFQ8N187 725 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 MIER2Q8N344 545 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 WDR48Q8TAF3 677 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 OR2A5Q96R48 311 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 DPYSL5Q9BPU6 564 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 C17orf62Q9BQA9 187 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 REXO4Q9GZR2 422 aaKnown RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 COPS7BQ9H9Q2 264 aaPredicted RBP13.48□□□□□ -0.25
CD4-208ENST00000538827 STARD5Q9NSY2 213 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 AHSPQ9NZD4 102 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 DLGAP4Q9Y2H0 992 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 TMED5Q9Y3A6 229 aa13.48□□□□□ -0.25
CD4-208ENST00000538827 GNG14A0A1W2PPG7 69 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 ARHGAP10A1A4S6 786 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 CCT8L1PA6NM43 557 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 PLPP1O14494 284 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 HCRTR1O43613 425 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms