RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SLC35A5Q9BS91 424 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 TMEM121BQ9BXQ6 578 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 BHLHE41Q9C0J9 482 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 CCDC177Q9NQR7 707 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 RASSF1Q9NS23 344 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 SPASTQ9UBP0 616 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 MAPRE3Q9UPY8 281 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF451Q9Y4E5 1061 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 FOXE1O00358 373 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 AXIN1O15169 862 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 MAGEB3O15480 346 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 PAPLNO95428 1278 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 KLK1P06870 262 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 RRM2P31350 389 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 PCGF2P35227 344 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 MVDP53602 400 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 PNLIPRP1P54315 467 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 TAS2R50P59544 299 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 NXPE4Q6UWF7 544 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 PIWIL3Q7Z3Z3 882 aaKnown RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF566Q969W8 418 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 SPATA9Q9BWV2 254 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 GPN2Q9H9Y4 310 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 ATP6V1HQ9UI12 483 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 ITIH1P19827 911 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 MPEG1Q2M385 716 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 FAM180BQ6P0A1 224 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 TMC5Q6UXY8 1006 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 MMAAQ8IVH4 418 aaKnown RBP23.89■■□□□ 1.42
RAB40C-204ENST00000538492 C16orf78Q8WTQ4 265 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 WDR34Q96EX3 536 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 DOHHQ9BU89 302 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 SORBS1Q9BX66 1292 aaKnown RBP23.89■■□□□ 1.42
RAB40C-204ENST00000538492 DEC1Q9P2X7 70 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 ASF1AQ9Y294 204 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 DGKBQ9Y6T7 804 aa23.89■■□□□ 1.42
RAB40C-204ENST00000538492 ZBTB11O95625 1053 aaPredicted RBP23.89■■□□□ 1.41
RAB40C-204ENST00000538492 C9P02748 559 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 FURINP09958 794 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 MAP2K4P45985 399 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 SLC16A12Q6ZSM3 486 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 CROCCP3Q8IVE0 287 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 PLA2G15Q8NCC3 412 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 TMIEQ8NEW7 156 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 PPCDCQ96CD2 204 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 FAM129BQ96TA1 746 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 APOL4Q9BPW4 351 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 ITM2CQ9NQX7 267 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 NDRG4Q9ULP0 352 aaKnown RBP23.89■■□□□ 1.41
RAB40C-204ENST00000538492 TESMINQ9Y4I5 508 aa23.89■■□□□ 1.41
RAB40C-204ENST00000538492 EDDM13A0A1B0GTR0 161 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 LINC01553A4QN01 128 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 HEPACAM2A8MVW5 462 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 KLHL18O94889 574 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 GSSP48637 474 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 AQP6Q13520 282 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 ELAVL3Q14576 367 aaKnown RBP23.88■■□□□ 1.41
RAB40C-204ENST00000538492 ZNF234Q14588 700 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 SPCS2Q15005 226 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 NPTX1Q15818 432 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 MMP21Q8N119 569 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 OR5AR1Q8NGP9 310 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 FAR1Q8WVX9 515 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 SMG7Q92540 1137 aaKnown RBP23.88■■□□□ 1.41
RAB40C-204ENST00000538492 ZDHHC5Q9C0B5 715 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 ATAD3AQ9NVI7 634 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 TDRKHQ9Y2W6 561 aaKnown RBP23.88■■□□□ 1.41
RAB40C-204ENST00000538492 ZNF99A8MXY4 864 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-204ENST00000538492 M0QX08 132 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 NDUFS2O75306 463 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 ACADLP28330 430 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 OR1E2P47887 323 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 PRSS53Q2L4Q9 553 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 TMEM240Q5SV17 173 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 KIAA1614Q5VZ46 1190 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 TSEN54Q7Z6J9 526 aaKnown RBP23.88■■□□□ 1.41
RAB40C-204ENST00000538492 CCDC71Q8IV32 467 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-204ENST00000538492 CXorf40BQ96DE9 158 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 MAP4K5Q9Y4K4 846 aa23.88■■□□□ 1.41
RAB40C-204ENST00000538492 PFDN1O60925 122 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 BCAS1O75363 584 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-204ENST00000538492 MYOGP15173 224 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 SELENOWP63302 87 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 TEAD4Q15561 434 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 CYP27C1Q4G0S4 372 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 CCDC81Q6ZN84 652 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 CACUL1Q86Y37 369 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 OR2L2Q8NH16 312 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 MIPOL1Q8TD10 442 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 DYRK4Q9NR20 520 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 TMEM184CQ9NVA4 438 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 CFAP20Q9Y6A4 193 aaKnown RBP23.87■■□□□ 1.41
RAB40C-204ENST00000538492 RPP38P78345 283 aaKnown RBP23.87■■□□□ 1.41
RAB40C-204ENST00000538492 SLC35A2P78381 396 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 FPGSQ05932 587 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 NPRL3Q12980 569 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 PPIGQ13427 754 aaKnown RBP eCLIP23.87■■□□□ 1.41
RAB40C-204ENST00000538492 CAMK2GQ13555 558 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-204ENST00000538492 FAHD1Q6P587 224 aa23.87■■□□□ 1.41
RAB40C-204ENST00000538492 C11orf96Q7Z7L8 435 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms