RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 LRRD1A4D1F6 860 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 SAGE2PA6NJ88 616 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 GZMAP12544 262 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 KLK7P49862 253 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 NR0B1P51843 470 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 ZNF136P52737 540 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 CSE1LP55060 971 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 FOXO1Q12778 655 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 CAPRIN1Q14444 709 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 ITIH4Q14624 930 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 TMED2Q15363 201 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 ACSF3Q4G176 576 aaPredicted RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 C6orf52Q5T4I8 152 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 RAD9BQ6WBX8 426 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 SYT10Q6XYQ8 523 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 FAM47EQ6ZV65 393 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 SEM1Q6ZVN7 128 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 BZW1Q7L1Q6 419 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 MTERF4Q7Z6M4 381 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 MEX3DQ86XN8 651 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 SLC22A15Q8IZD6 547 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 PQLC3Q8N755 202 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 LRRC45Q96CN5 670 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 ERGIC2Q96RQ1 377 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 GALNT8Q9NY28 637 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 KLHL8Q9P2G9 620 aaPredicted RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 SONP18583 2426 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 TRBV11-1A0A0K0K1C0 115 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 FEZF1A0PJY2 475 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 PINLYPA6NC86 204 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 APOL1O14791 398 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 P04436 131 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 CREB1P16220 341 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 NFKB1P19838 968 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 HNF1AP20823 631 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 RPA3P35244 121 aaPredicted RBP8.49□□□□□ -1.05
USP28-205ENST00000537706 BCL6P41182 706 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 EEF1A1P68104 462 aaKnown RBP8.49□□□□□ -1.05
USP28-205ENST00000537706 RHAGQ02094 409 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 EEF1A1P5Q5VTE0 462 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 HMGCLL1Q8TB92 370 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 ASZ1Q8WWH4 475 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 TSLPQ969D9 159 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 FOPNLQ96NB1 174 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 FCRL5Q96RD9 977 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 DESI2Q9BSY9 194 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 SACM1LQ9NTJ5 587 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 JKAMPQ9P055 326 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 SPATA7Q9P0W8 599 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 PCYOX1Q9UHG3 505 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 CAPN11Q9UMQ6 739 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 ANK2Q01484 3957 aa8.49□□□□□ -1.05
USP28-205ENST00000537706 TRBV5-4A0A0C4DH59 114 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 MYO1FO00160 1098 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 CDC123O75794 336 aaPredicted RBP8.48□□□□□ -1.05
USP28-205ENST00000537706 APOA4P06727 396 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 CCNFP41002 786 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 MC3RP41968 323 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 GEMP55040 296 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 SKP1P63208 163 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 HSPA14Q0VDF9 509 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 SQLEQ14534 574 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 NSUN5P2Q63ZY6 315 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 RTL4Q6ZR62 310 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 ADCK2Q7Z695 626 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 OR8K1Q8NGG5 319 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 OR13C4Q8NGS5 318 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 OR2A1Q8NGT9 310 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 RNF157Q96PX1 679 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 ALS2CR12Q96Q35 445 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 EBNA1BP2Q99848 306 aaKnown RBP8.48□□□□□ -1.05
USP28-205ENST00000537706 PIGMQ9H3S5 423 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 SPRR3Q9UBC9 169 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 ANAPC7Q9UJX3 599 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 OR2W5A6NFC9 320 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 EPHB6O15197 1021 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 KIF5CO60282 957 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 TMIGD3P0DMS9 266 aaPredicted RBP8.48□□□□□ -1.05
USP28-205ENST00000537706 EGR1P18146 543 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 CRYGSP22914 178 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 CYLC1P35663 651 aaPredicted RBP8.48□□□□□ -1.05
USP28-205ENST00000537706 MTTPP55157 894 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 RPS4XP62701 263 aaKnown RBP8.48□□□□□ -1.05
USP28-205ENST00000537706 RELAQ04206 551 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 DBN1Q16643 649 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 HIST2H2BDQ6DRA6 164 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 IL20RBQ6UXL0 311 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 PID1Q7Z2X4 250 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 LUZP2Q86TE4 346 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 ANKRD7Q92527 254 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 PEX11GQ96HA9 241 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 OR2A5Q96R48 311 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 VAT1Q99536 393 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 MED18Q9BUE0 208 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 ACAT2Q9BWD1 397 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 SFXN3Q9BWM7 321 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 C12orf65Q9H3J6 166 aaKnown RBP8.48□□□□□ -1.05
USP28-205ENST00000537706 ACBD3Q9H3P7 528 aa8.48□□□□□ -1.05
USP28-205ENST00000537706 ARID1AO14497 2285 aa8.47□□□□□ -1.05
USP28-205ENST00000537706 SCN2AQ99250 2005 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms