RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MACROD1Q9BQ69 325 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 RHNO1Q9BSD3 238 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SLC25A51Q9H1U9 297 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 FBXW2Q9UKT8 454 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 LIPT1Q9Y234 373 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SAGE2PA6NJ88 616 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 CD8B2A6NJW9 211 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 A8MVJ9 347 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 H0YIG0 161 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 LIN7AO14910 233 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-217ENST00000537162 KPNA5O15131 536 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 KLF4O43474 513 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 OR2J2O76002 312 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 IL1RNP18510 177 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 SOX3P41225 446 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 AVPR1BP47901 424 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 MPP1Q00013 466 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 FAM53BQ14153 422 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 ATL3Q6DD88 541 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 FAM47EQ6ZV65 393 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 SH2D5Q6ZV89 423 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 PDSS2Q86YH6 399 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 LILRB1Q8NHL6 650 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-217ENST00000537162 CFAP61Q8NHU2 1237 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 ELMO1Q92556 727 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 NTNG2Q96CW9 530 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 PEX11GQ96HA9 241 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 QRFPRQ96P65 431 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 PHACTR1Q9C0D0 580 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 ZNF703Q9H7S9 590 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-217ENST00000537162 ZNHIT6Q9NWK9 470 aaKnown RBP8.69□□□□□ -1.02
CPSF7-217ENST00000537162 HPF1Q9NWY4 346 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 KCNS2Q9ULS6 477 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 MAGED1Q9Y5V3 778 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-217ENST00000537162 HEATR5BQ9P2D3 2071 aa8.69□□□□□ -1.02
CPSF7-217ENST00000537162 C15orf38-AP3S2A0A0A6YYH1 394 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 FAM157AC9JC47 383 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 EPHB6O15197 1021 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ZNF354AO60765 605 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 RDH16O75452 317 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 SMC2O95347 1197 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 THBDP07204 575 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 CCL3P10147 92 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ATP1A3P13637 1013 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 PIGAP37287 484 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 CCNFP41002 786 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 BCL6P41182 706 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 MTIF2P46199 727 aaKnown RBP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 WNT3AP56704 352 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 P3H1Q32P28 736 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 AWAT1Q58HT5 328 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 DCST1Q5T197 706 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 CCDC183Q5T5S1 534 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 FAM166AQ6J272 317 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 PCGF5Q86SE9 256 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 PLD3Q8IV08 490 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 GCNT2Q8N0V5 402 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 FMR1NBQ8N0W7 255 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 OR5T3Q8NGG3 340 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 OR13C4Q8NGS5 318 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 AKAP1Q92667 903 aaKnown RBP eCLIP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 SCYL1Q96KG9 808 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 PKP2Q99959 881 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 AARSD1Q9BTE6 412 aaKnown RBP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ACAT2Q9BWD1 397 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 GANQ9H2C0 597 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 MANSC1Q9H8J5 431 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 VPS37BQ9H9H4 285 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 GLOD4Q9HC38 313 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ZDHHC3Q9NYG2 299 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ZFATQ9P243 1243 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 CAMK2AQ9UQM7 478 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 ATG4BQ9Y4P1 393 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 MED12LQ86YW9 2145 aa8.68□□□□□ -1.02
CPSF7-217ENST00000537162 LOC100289279A0A1B0GTE1 492 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 ZNF860A6NHJ4 632 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 LRRC3CA6NJW4 275 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 CFAP99D6REC4 459 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 BIN1O00499 593 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 KDM1AO60341 852 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 FKBP9O95302 570 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 NSA2O95478 260 aaKnown RBP8.67□□□□□ -1.02
CPSF7-217ENST00000537162 DANCRP0C864 163 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 HNF1AP20823 631 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 KLK7P49862 253 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 JAM2P57087 298 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 BTG2P78543 158 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 PPIDQ08752 370 aaKnown RBP8.67□□□□□ -1.02
CPSF7-217ENST00000537162 FAPQ12884 760 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 DUSP8Q13202 625 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 SLC14A2Q15849 920 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
CPSF7-217ENST00000537162 ADGRD1Q6QNK2 874 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms