RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 CDKL4Q5MAI5 379 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 CATSPEREQ5SY80 951 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 PAPD4Q6PIY7 484 aaKnown RBP12.4□□□□□ -0.42
MRPS35-202ENST00000536569 MAATS1Q7Z4T9 603 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 ANKMY2Q8IV38 441 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 HORMAD2Q8N7B1 307 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 UTP15Q8TED0 518 aaKnown RBP12.4□□□□□ -0.42
MRPS35-202ENST00000536569 CDKL2Q92772 493 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 DERL2Q9GZP9 239 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 CTNNAL1Q9UBT7 734 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 SLC22A14Q9Y267 594 aa12.4□□□□□ -0.42
MRPS35-202ENST00000536569 SCN2AQ99250 2005 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 SYNDIG1LA6NDD5 238 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 CDC7O00311 574 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 H2AFYO75367 372 aaKnown RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 MLYCDO95822 493 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 SERPIND1P05546 499 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 ZNF888P0CJ79 500 aaPredicted RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 SMIM10L1P0DMW3 83 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 RNH1P13489 461 aaKnown RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 RPL21P46778 160 aaKnown RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 SLC12A2P55011 1212 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 OR4D2P58180 307 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 SLC26A5P58743 744 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 TAS2R39P59534 338 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 STXBP1P61764 594 aaKnown RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 RBPJQ06330 500 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 CALCOCO2Q13137 446 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 ZRSR2Q15696 482 aaKnown RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 ZNF766Q5HY98 468 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 MTFR2Q6P444 385 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 FRA10AC1Q70Z53 315 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 ZBED8Q8IZ13 594 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 BEST3Q8N1M1 668 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 TCAIMQ8N3R3 496 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 ANKRD53Q8N9V6 530 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 OR5T3Q8NGG3 340 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 PYROXD1Q8WU10 500 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 MOCOSQ96EN8 888 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 SMIM10Q96HG1 83 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 EGFL8Q99944 293 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 UTP23Q9BRU9 249 aaKnown RBP12.39□□□□□ -0.43
MRPS35-202ENST00000536569 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 PHACTR1Q9C0D0 580 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 NT5DC2Q9H857 520 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 GPAMQ9HCL2 828 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 GPRC5BQ9NZH0 403 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 WHRNQ9P202 907 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 COPG2Q9UBF2 871 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 IKZF3Q9UKT9 509 aa12.39□□□□□ -0.43
MRPS35-202ENST00000536569 NPEPPSL1A6NEC2 478 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 OR2W5A6NFC9 320 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 ZNF860A6NHJ4 632 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 PSMD12O00232 456 aaPredicted RBP12.38□□□□□ -0.43
MRPS35-202ENST00000536569 PRMT3O60678 531 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 CDC123O75794 336 aaPredicted RBP12.38□□□□□ -0.43
MRPS35-202ENST00000536569 GSTA2P09210 222 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 C1GALT1C1LP0DN25 315 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 CD46P15529 392 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SAT1P21673 171 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 DCTP40126 519 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SLC6A12P48065 614 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 PGGT1BP53609 377 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 HYAL2Q12891 473 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 TUBA3CQ13748 450 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 FASTKD3Q14CZ7 662 aaKnown RBP12.38□□□□□ -0.43
MRPS35-202ENST00000536569 TUBA3EQ6PEY2 450 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 TMPRSS11BQ86T26 416 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 CRLF3Q8IUI8 442 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 KRT78Q8N1N4 520 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 TMEM178AQ8NBL3 297 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 MDS2Q8NDY4 140 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 ARMC2Q8NEN0 867 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 ELP5Q8TE02 316 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 CREB3L4Q8TEY5 395 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 RHBDF1Q96CC6 855 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SCMH1Q96GD3 660 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 KRT12Q99456 494 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 CPNE1Q99829 537 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 NPLQ9BXD5 320 aaPredicted RBP12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SPNS1Q9H2V7 528 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 EHD1Q9H4M9 534 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 CNOT10Q9H9A5 744 aaKnown RBP12.38□□□□□ -0.43
MRPS35-202ENST00000536569 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 TXNDC16Q9P2K2 825 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SEC14L3Q9UDX4 400 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 MMACHCQ9Y4U1 282 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 NBPF19A0A087WUL8 3843 aa12.38□□□□□ -0.43
MRPS35-202ENST00000536569 SCN3AQ9NY46 2000 aa12.37□□□□□ -0.43
MRPS35-202ENST00000536569 A0A088AWK7 358 aa12.37□□□□□ -0.43
MRPS35-202ENST00000536569 IGKV3D-11A0A0A0MRZ8 115 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms