RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ERN2Q76MJ5 926 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 GALNT15Q8N3T1 639 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 PYURFQ96I23 114 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 FBXL18Q96ME1 805 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF641Q96N77 438 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF69Q9UC07 566 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 PCDHGA2Q9Y5H1 932 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC22A1O15245 554 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 SRCP12931 536 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 IFI30P13284 250 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 CDH11P55287 796 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 HSH2DQ96JZ2 352 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 ALPK1Q96QP1 1244 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 BRF2Q9HAW0 419 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 ASB6Q9NWX5 421 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 OAZ3Q9UMX2 235 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 TMEM5Q9Y2B1 443 aa17.58■□□□□ 0.41
SFSWAP-203ENST00000535236 HCRTO43612 131 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 CNTN5O94779 1100 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 CFHP08603 1231 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF16P17020 682 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 FOXN2P32314 431 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 RPS21P63220 83 aaKnown RBP17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC44A3Q8N4M1 653 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 CCDC120Q96HB5 630 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 OR2M4Q96R27 311 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 C17orf62Q9BQA9 187 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 SGIP1Q9BQI5 828 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 NLGN3Q9NZ94 848 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 LAMP5Q9UJQ1 280 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 SLIT2O94813 1529 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 G6PDP11413 515 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 VSX2P58304 361 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 WSCD2Q2TBF2 565 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 CANT1Q8WVQ1 401 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 IGSF21Q96ID5 467 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 DMRTB1Q96MA1 342 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 OR52B2Q96RD2 323 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 MAGEE1Q9HCI5 957 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 TAS2R1Q9NYW7 299 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 C8BP07358 591 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 POU6F2P78424 691 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 PLEKHS1Q5SXH7 462 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 TXNRD3NBQ6F5E7 133 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF611Q8N823 705 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 OR4K14Q8NGD5 310 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 RAD9AQ99638 391 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 PRODH2Q9UF12 536 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 IFT52Q9Y366 437 aa17.58■□□□□ 0.4
SFSWAP-203ENST00000535236 LCHNA4D1U4 455 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 F2P00734 622 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 S100A10P60903 97 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 CILP2Q8IUL8 1156 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 EBF2Q9HAK2 575 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 C2orf92A0A1B0GVN3 265 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 H3BSH0 61 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 AXIN1O15169 862 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 VILLO15195 856 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 PEPDP12955 493 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 PFKLP17858 780 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 DNAJB1P25685 340 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 MAPK3P27361 379 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 RPL6Q02878 288 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 ZDHHC24Q6UX98 284 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 FOXRED2Q8IWF2 684 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 KIAA1191Q96A73 305 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 MOAP1Q96BY2 351 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 GPR22Q99680 433 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 ITPAQ9BY32 194 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 IL21RQ9HBE5 538 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 TXNRD2Q9NNW7 524 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 TAS2R9Q9NYW1 312 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 DLGAP4Q9Y2H0 992 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 NID2Q14112 1375 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 OAZ2O95190 189 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF792Q3KQV3 632 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 GPAT4Q86UL3 456 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 TRIM74Q86UV6 250 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC7A6OSQ96CW6 309 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 NSUN3Q9H649 340 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 MRM3Q9HC36 420 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 SPATA6Q9NWH7 488 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 TEX13DA0A0J9YY54 714 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 CAPN5O15484 640 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 TLX2O43763 284 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF33AQ06730 810 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 MRPL49Q13405 166 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 C1orf189Q5VU69 101 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC25A25Q6KCM7 469 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 RNF130Q86XS8 419 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 NRROSQ86YC3 692 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 OR2L2Q8NH16 312 aa17.57■□□□□ 0.4
SFSWAP-203ENST00000535236 A6NCN8 305 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 LEFTY1O75610 366 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 HLA-DPB1P04440 258 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF805Q5CZA5 627 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 PACRGLQ8N7B6 248 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 PRSS51A0A1B0GVH4 220 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 GKP32189 559 aa17.56■□□□□ 0.4
SFSWAP-203ENST00000535236 CASP6P55212 293 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms