RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ARMC8Q8IUR7 673 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 OR9Q2Q8NGE9 314 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 OR5AK3PQ8NH89 298 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF461Q8TAF7 563 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 CSGALNACT1Q8TDX6 532 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 GTPBP3Q969Y2 492 aaKnown RBP18.62■□□□□ 0.57
CAPN1-226ENST00000533820 C7orf34Q96L11 122 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 CCNB1IP1Q9NPC3 277 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 RHCGQ9UBD6 479 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 OSGIN1Q9UJX0 560 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 FRMPD3Q5JV73 1810 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-226ENST00000533820 GFRA2O00451 464 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 CCL23P55773 120 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 ITGA1P56199 1179 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 PFN3P60673 137 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 KCNJ10P78508 379 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 IER5LQ5T953 404 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 PXDC1Q5TGL8 231 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 LYPLAL1Q5VWZ2 237 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 OR2AP1Q8NGE2 309 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 NIPSNAP1Q9BPW8 284 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF717Q9BY31 904 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-226ENST00000533820 MOV10Q9HCE1 1003 aaKnown RBP18.61■□□□□ 0.57
CAPN1-226ENST00000533820 SNTNA6NMZ2 147 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 SNPHO15079 494 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 SPIBQ01892 262 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 CPTPQ5TA50 214 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 LYSMD2Q8IV50 215 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 CHCHD4Q8N4Q1 142 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 DHRS9Q9BPW9 319 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 BRD9Q9H8M2 597 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 DDX28Q9NUL7 540 aaKnown RBP18.61■□□□□ 0.57
CAPN1-226ENST00000533820 ABCB8Q9NUT2 735 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 CFAP97Q9P2B7 532 aa18.61■□□□□ 0.57
CAPN1-226ENST00000533820 A0A1W2PQ45 241 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-226ENST00000533820 A0A1W2PQY0 241 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 SELPP16109 830 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 POU1F1P28069 291 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 CTSKP43235 329 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 SLC6A12P48065 614 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 CTAG1AP78358 180 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 MRPS15P82914 257 aaKnown RBP18.6■□□□□ 0.57
CAPN1-226ENST00000533820 SRSF11Q05519 484 aaKnown RBP18.6■□□□□ 0.57
CAPN1-226ENST00000533820 GANABQ14697 944 aaKnown RBP18.6■□□□□ 0.57
CAPN1-226ENST00000533820 TPRG1Q6ZUI0 275 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 SPATC1Q76KD6 591 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 CACTIN-AS1Q8N1I8 211 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 STX19Q8N4C7 294 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 L3MBTL4Q8NA19 623 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 GALNT6Q8NCL4 622 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 GGHQ92820 318 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 EMILIN2Q9BXX0 1053 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 SGK2Q9HBY8 427 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 ADPRHL2Q9NX46 363 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 B4GALT6Q9UBX8 382 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 PCDHB11Q9Y5F2 797 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 DOCK6Q96HP0 2047 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 PTHP01270 115 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 CYP2A7P20853 494 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 GRK3P35626 688 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 ZFYVE19Q96K21 471 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 SAMD11Q96NU1 681 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 FERD3LQ96RJ6 166 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 OGDHLQ9ULD0 1010 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 MGAT4DA6NG13 374 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 JUPP14923 745 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 MTAPQ13126 283 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 DMC1Q14565 340 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 FAHD1Q6P587 224 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 DPY19L3Q6ZPD9 716 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 TSEN54Q7Z6J9 526 aaKnown RBP18.6■□□□□ 0.57
CAPN1-226ENST00000533820 ASCC1Q8N9N2 400 aaKnown RBP18.6■□□□□ 0.57
CAPN1-226ENST00000533820 CHST14Q8NCH0 376 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 OR10G2Q8NGC3 310 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 OR4A15Q8NGL6 344 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 TP53INP1Q96A56 240 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 HSPE1-MOB4S4R3N1 261 aa18.6■□□□□ 0.57
CAPN1-226ENST00000533820 LINC00854A0A1B0GVQ3 168 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 SCO2O43819 266 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 RFPL2O75678 378 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 UPK1BO75841 260 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 HLA-EP13747 358 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 BDKRB1P46663 353 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 MC1RQ01726 317 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 PPIGQ13427 754 aaKnown RBP eCLIP18.59■□□□□ 0.578e-7■■■□□ 16.7
CAPN1-226ENST00000533820 TPRG1LQ5T0D9 272 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 USP45Q70EL2 814 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 THOC6Q86W42 341 aaKnown RBP18.59■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF675Q8TD23 568 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 SCRN2Q96FV2 425 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 ERVW-1Q9UQF0 538 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-226ENST00000533820 SEMG1P04279 462 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 C8GP07360 202 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 ATP1B2P14415 290 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-226ENST00000533820 EIF2B5Q13144 721 aaKnown RBP18.59■□□□□ 0.57
CAPN1-226ENST00000533820 RGNQ15493 299 aa18.59■□□□□ 0.57
CAPN1-226ENST00000533820 IQCCQ4KMZ1 466 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms