RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 PIK3CBP42338 1070 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 DNAJB13P59910 316 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 ASPHQ12797 758 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 COL9A2Q14055 689 aaPredicted RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 CASP8Q14790 479 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 NKG7Q16617 165 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 UGT8Q16880 541 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 UNC50Q53HI1 259 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 COX15Q7KZN9 410 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 SRFBP1Q8NEF9 429 aaKnown RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 UTP15Q8TED0 518 aaKnown RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 GAL3ST3Q96A11 431 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 FAR2Q96K12 515 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 REXO4Q9GZR2 422 aaKnown RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 ZBTB26Q9HCK0 441 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 SSU72Q9NP77 194 aaKnown RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 MKKSQ9NPJ1 570 aaPredicted RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 C14orf105Q9NVL8 296 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 TRPC4Q9UBN4 977 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 PTRH2Q9Y3E5 179 aaKnown RBP18.81■□□□□ 0.6
CHEK1-215ENST00000533778 NAALAD2Q9Y3Q0 740 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 ACTL7BQ9Y614 415 aa18.81■□□□□ 0.6
CHEK1-215ENST00000533778 IGLV3-12A0A075B6K2 115 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 VSTM2BA6NLU5 285 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 GALR3O60755 368 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 SPAG7O75391 227 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 KLF7O75840 302 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 KLHL18O94889 574 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 ZNF888P0CJ79 500 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CDH13P55290 713 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 RPS18P62269 152 aaKnown RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CDC20Q12834 499 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 HYAL2Q12891 473 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 ERV3-1Q14264 604 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 SSPNQ14714 243 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CPSF6Q16630 551 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 GGTA1PQ4G0N0 100 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 DEFB134Q4QY38 66 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 TMEM35AQ53FP2 167 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CFAP157Q5JU67 520 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 TTC19Q6DKK2 380 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CHSY3Q70JA7 882 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 DTWD1Q8N5C7 304 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 ARMC2Q8NEN0 867 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 OR52B6Q8NGF0 335 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 TCP10LQ8TDR4 215 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 TRPC4APQ8TEL6 797 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 ZNF473Q8WTR7 871 aaKnown RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 SREK1Q8WXA9 508 aaKnown RBP18.8■□□□□ 0.6
CHEK1-215ENST00000533778 THAP4Q8WY91 577 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 NACC2Q96BF6 587 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 MIEF2Q96C03 454 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CMTM7Q96FZ5 175 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 CENPKQ9BS16 269 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 OXSMQ9NWU1 459 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 RNF11Q9Y3C5 154 aa18.8■□□□□ 0.6
CHEK1-215ENST00000533778 MAP1BP46821 2468 aaKnown RBP18.79■□□□□ 0.6
CHEK1-215ENST00000533778 H3BQF6 201 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 SGK494L7N484 410 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 SMIM10L1P0DMW3 83 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 PRKAR1AP10644 381 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 IL10P22301 178 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 RAB8AP61006 207 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 LCP2Q13094 533 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 TRAF3Q13114 568 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 ZRSR2Q15696 482 aaKnown RBP18.79■□□□□ 0.6
CHEK1-215ENST00000533778 ADPRMQ3LIE5 342 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 TNFAIP8L3Q5GJ75 292 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 LIPMQ5VYY2 423 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 TRIM40Q6P9F5 258 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 VN1R5Q7Z5H4 357 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 EXOC3L1Q86VI1 746 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 RAB43Q86YS6 212 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 CCNYL1Q8N7R7 359 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 AMER3Q8N944 861 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 OR2L5Q8NG80 312 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 OR4F6Q8NGB9 312 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 HUS1BQ8NHY5 278 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 STT3BQ8TCJ2 826 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 MS4A6EQ96DS6 147 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 SMIM10Q96HG1 83 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 PKNOX2Q96KN3 472 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 IP6K3Q96PC2 410 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 FAM111AQ96PZ2 611 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 CDK15Q96Q40 435 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 ZNF382Q96SR6 550 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 TGIF2Q9GZN2 237 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 ROGDIQ9GZN7 287 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 C12orf65Q9H3J6 166 aaKnown RBP18.79■□□□□ 0.6
CHEK1-215ENST00000533778 KLHL31Q9H511 634 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 PSD3Q9NYI0 1048 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 CTSFQ9UBX1 484 aa18.79■□□□□ 0.6
CHEK1-215ENST00000533778 CDC14CA4D256 554 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 FOXE1O00358 373 aaPredicted RBP18.78■□□□□ 0.6
CHEK1-215ENST00000533778 ERI3O43414 337 aaKnown RBP18.78■□□□□ 0.6
CHEK1-215ENST00000533778 TYROBPO43914 113 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 IGHEP01854 428 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 ITGB2P05107 769 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 ZGLP1P0C6A0 271 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 PTX3P26022 381 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms