RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ASIC5Q9NY37 505 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 TMEM181Q9P2C4 612 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 FEZF1A0PJY2 475 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 MAGEB17A8MXT2 336 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 GCKP35557 465 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 LSSP48449 732 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 EPHA4P54764 986 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PAGE2BQ5JRK9 111 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 IRGCQ6NXR0 463 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PLD3Q8IV08 490 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 OR4K1Q8NGD4 311 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 HUS1BQ8NHY5 278 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 NCSTNQ92542 709 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 AHCYL2Q96HN2 611 aaKnown RBP17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PELI2Q9HAT8 420 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PRM3Q9NNZ6 103 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PARD6AQ9NPB6 346 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 IGHV1OR21-1A0A087WYE8 117 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 SERTM1A2A2V5 107 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 A6NHS1 94 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 CCNDBP1O95273 360 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 SDC1P18827 310 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 MAGP20916 626 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 GRIA3P42263 894 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 GPR3P46089 330 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 CSTF3Q12996 717 aaKnown RBP17.68■□□□□ 0.42
SMPD1-208ENST00000533123 FLOT2Q14254 428 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 MED27Q6P2C8 311 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 DBX2Q6ZNG2 339 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 HOMEZQ8IX15 550 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 TSSK3Q96PN8 268 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 EDEM2Q9BV94 578 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 DPY30Q9C005 99 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PCDHAC1Q9H158 963 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 ABCG4Q9H172 646 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 EVA1BQ9NVM1 165 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 TMEM45AQ9NWC5 275 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 LEF1Q9UJU2 399 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-208ENST00000533123 PCDHGA11Q9Y5H2 935 aa17.68■□□□□ 0.42
SMPD1-208ENST00000533123 EME2A4GXA9 379 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 NME4O00746 187 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PVRP15151 417 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 SLC6A2P23975 617 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 GRK6P43250 576 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PLIN5Q00G26 463 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 NR1D2Q14995 579 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 RBBP5Q15291 538 aaKnown RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 HIST2H2ACQ16777 129 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PROX2Q3B8N5 592 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 FAM174BQ3ZCQ3 159 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PERM1Q5SV97 790 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 HIST2H2AA3Q6FI13 130 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 TMIGD1Q6UXZ0 262 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 AIF1LQ9BQI0 150 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 GID8Q9NWU2 228 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 STX18Q9P2W9 335 aaKnown RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 CD300AQ9UGN4 299 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 POMT2Q9UKY4 750 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PCDHGB2Q9Y5G2 931 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 ACOT8O14734 319 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 CAPN5O15484 640 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PRAMEF10O60809 474 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 HOXB3P14651 431 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 PTDSS1P48651 473 aaKnown RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 DAB2P98082 770 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 CSRP2Q16527 193 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 SPANXN4Q5MJ08 99 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 FAM92BQ6ZTR7 304 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 USP53Q70EK8 1073 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 BHLHE22Q8NFJ8 381 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-208ENST00000533123 OR6C4Q8NGE1 309 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 DNAJB14Q8TBM8 379 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 S100A14Q9HCY8 104 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 TMEM184CQ9NVA4 438 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 CMTM6Q9NX76 183 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 VPS29Q9UBQ0 182 aa17.67■□□□□ 0.42
SMPD1-208ENST00000533123 NPIPB8E9PQR5 432 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 HAT1O14929 419 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 LCMT2O60294 686 aaKnown RBP17.66■□□□□ 0.42
SMPD1-208ENST00000533123 GFERP55789 205 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 LAPTM5Q13571 262 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 SLC5A12Q1EHB4 618 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 ZNF425Q6IV72 752 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 NOXRED1Q6NXP6 359 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 SPRED1Q7Z699 444 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 SLC15A3Q8IY34 581 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 KIAA2013Q8IYS2 634 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 KRT78Q8N1N4 520 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 RHBDD1Q8TEB9 315 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 NRG4Q8WWG1 115 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 JADE3Q92613 823 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 EGLN2Q96KS0 407 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 TGM7Q96PF1 710 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 ZBTB18Q99592 522 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 HOPXQ9BPY8 73 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-208ENST00000533123 CLMPQ9H6B4 373 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 ABCD2Q9UBJ2 740 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 SNX7Q9UNH6 387 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 LRATO95237 230 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 CKMT1AP12532 417 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms