RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 RGS14O43566 566 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 SRPX2O60687 465 aaPredicted RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 DIAPH2O60879 1101 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 SH3BGRLO75368 114 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 ATP6AP2O75787 350 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 MT-CO3P00414 261 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 TGFB1P01137 390 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 EIF2S1P05198 315 aaKnown RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 SERPINA6P08185 405 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 EPHA3P29320 983 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 HNRNPH1P31943 449 aaKnown RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 CSTF2P33240 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 RGS1Q08116 209 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 HYAL2Q12891 473 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 TUBB3Q13509 450 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 NR6A1Q15406 480 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 IMPG1Q17R60 797 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 ISXQ2M1V0 245 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 HKDC1Q2TB90 917 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 KHDRBS2Q5VWX1 349 aaKnown RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 EPGNQ6UW88 154 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 Q6ZSR9 355 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 SPATA21Q7Z572 469 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 CAMKVQ8NCB2 501 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 AGBL5Q8NDL9 886 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 N4BP2L2Q92802 583 aaPredicted RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 MAELQ96JY0 434 aaKnown RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 BBC3Q96PG8 261 aaPredicted RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 DEPDC7Q96QD5 511 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 SERPINI1Q99574 410 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 EBF4Q9BQW3 602 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 SLC6A16Q9GZN6 736 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 OR51B5Q9H339 312 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 WDR55Q9H6Y2 383 aaPredicted RBP13.63□□□□□ -0.23
COL16A1-217ENST00000532877 KCNK13Q9HB14 408 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 PSD3Q9NYI0 1048 aa13.63□□□□□ -0.23
COL16A1-217ENST00000532877 GOLGA8QA0A0J9YX86 632 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 GOLGA8OA6NCC3 632 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 LRIT2A6NDA9 550 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 NPIPB8E9PQR5 432 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 GOLGA8NF8WBI6 632 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 LSM1O15116 133 aaKnown RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 CSO75390 466 aaKnown RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 FAM107AO95990 144 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 PTX3P26022 381 aaPredicted RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 IDH3AP50213 366 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 ACY1Q03154 408 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 CUL3Q13618 768 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 PRTGQ2VWP7 1150 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 ADPRMQ3LIE5 342 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 TOR1AIP1Q5JTV8 583 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 WASHC2DQ5SRD0 308 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 ZNF655Q8N720 491 aaPredicted RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 KCT2Q8NC54 265 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 OR1L3Q8NH93 324 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 C10orf82Q8WW14 230 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 STON2Q8WXE9 905 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 TUBGCP3Q96CW5 907 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 ZNF501Q96CX3 271 aaPredicted RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 F2RL3Q96RI0 385 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 CCT8L2Q96SF2 557 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 ELAC2Q9BQ52 826 aaKnown RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 TMEM120AQ9BXJ8 343 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 NLNQ9BYT8 704 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 STRADBQ9C0K7 418 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 REXO4Q9GZR2 422 aaKnown RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 FANCEQ9HB96 536 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 ENAMQ9NRM1 1142 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 FGF21Q9NSA1 209 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 STARD5Q9NSY2 213 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 RIC8BQ9NVN3 520 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 OCIAD1Q9NX40 245 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 VPS29Q9UBQ0 182 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 GIMAP2Q9UG22 337 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 CLCA2Q9UQC9 943 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 RUVBL1Q9Y265 456 aaKnown RBP13.62□□□□□ -0.23
COL16A1-217ENST00000532877 KALRNO60229 2985 aa13.62□□□□□ -0.23
COL16A1-217ENST00000532877 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 FITM1A5D6W6 292 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 EFCAB7A8K855 629 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 C4orf51C9J302 202 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 H3BMH7 237 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 SAP18O00422 153 aaKnown RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TXNDC9O14530 226 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 SNX3O60493 162 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 VPS4BO75351 444 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 SEMA3DO95025 777 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 PRR35P0CG20 571 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 PRPH2P23942 346 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 ITGA1P56199 1179 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 STXBP1P61764 594 aaKnown RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 CBX1P83916 185 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TBL3Q12788 808 aaKnown RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 ATP6AP1LQ52LC2 224 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TMEM35AQ53FP2 167 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TCTE1Q5JU00 501 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms