RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 STXBP1P61764 594 aaKnown RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 TRA2AQ13595 282 aaKnown RBP eCLIP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 RFTN2Q52LD8 501 aaPredicted RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 C6orf136Q5SQH8 315 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 C1orf52Q8N6N3 182 aaKnown RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 ZNF655Q8N720 491 aaPredicted RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 FNDC5Q8NAU1 212 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 OR1L3Q8NH93 324 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 NT5CQ8TCD5 201 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 MS4A6EQ96DS6 147 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 OR6C1Q96RD1 312 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 C17orf62Q9BQA9 187 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 CENPKQ9BS16 269 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 CCDC28BQ9BUN5 200 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 SLC6A16Q9GZN6 736 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 OCIAD1Q9NX40 245 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 HEY2Q9UBP5 337 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 RUVBL1Q9Y265 456 aaKnown RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 ARL2BPQ9Y2Y0 163 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 SPEGQ15772 3267 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 EFCAB7A8K855 629 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 ERI3O43414 337 aaKnown RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 OR2B3O76000 313 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 GBAP04062 536 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 ZNF888P0CJ79 500 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 NCF2P19878 526 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 SNRPNP63162 240 aaKnown RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 ACSM2AQ08AH3 577 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 TBL3Q12788 808 aaKnown RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 TUBB3Q13509 450 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 CUL3Q13618 768 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 HES3Q5TGS1 186 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 ACSM2BQ68CK6 577 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 ZFAND4Q86XD8 727 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 CCDC197Q8NCU1 140 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 AGBL5Q8NDL9 886 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 RGMAQ96B86 450 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 CATSPER2Q96P56 530 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 EBPLQ9BY08 206 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 FANCEQ9HB96 536 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 PPT2Q9UMR5 302 aa18.14■□□□□ 0.49
SMPD1-205ENST00000531303 MRPS2Q9Y399 296 aaKnown RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 POLR3HQ9Y535 204 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-205ENST00000531303 KNTC1P50748 2209 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 C4orf51C9J302 202 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 PLPP1O14494 284 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 HYAL3O43820 417 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-205ENST00000531303 CSO75390 466 aaKnown RBP18.13■□□□□ 0.49
SMPD1-205ENST00000531303 PRR35P0CG20 571 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 ACY1Q03154 408 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 TMEM35AQ53FP2 167 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 CDCP2Q5VXM1 449 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 RIPOR1Q6ZS17 1223 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 UBE3DQ7Z6J8 389 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 CACNA2D3Q8IZS8 1091 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 CHTF18Q8WVB6 975 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 AHSPQ9NZD4 102 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 SERTAD3Q9UJW9 196 aa18.13■□□□□ 0.49
SMPD1-205ENST00000531303 HYKKA2RU49 373 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 TXNDC9O14530 226 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 UBDO15205 165 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 KLK1P06870 262 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 CEACAM1P13688 526 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 PRPH2P23942 346 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 CCKBRP32239 447 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 ITGA1P56199 1179 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 ERVK-8P63133 956 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 BTN3A2P78410 334 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 RSPO4Q2I0M5 234 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-205ENST00000531303 ISXQ2M1V0 245 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 PRTGQ2VWP7 1150 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 ADPRMQ3LIE5 342 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 SPIN4Q56A73 249 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 TCTE1Q5JU00 501 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 PRAMEF17Q5VTA0 474 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 IL23RQ5VWK5 629 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 TRIM40Q6P9F5 258 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 COMMD6Q7Z4G1 85 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 GPR135Q8IZ08 494 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 METTL4Q8N3J2 472 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 OR2L5Q8NG80 312 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 UTP15Q8TED0 518 aaKnown RBP18.12■□□□□ 0.49
SMPD1-205ENST00000531303 ZNF501Q96CX3 271 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-205ENST00000531303 STRADBQ9C0K7 418 aa18.12■□□□□ 0.49
SMPD1-205ENST00000531303 AKAP7Q9P0M2 348 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-205ENST00000531303 URADA6NGE7 173 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 ZSCAN9O15535 394 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-205ENST00000531303 EEDO75530 441 aaKnown RBP18.11■□□□□ 0.49
SMPD1-205ENST00000531303 MYO1DO94832 1006 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 SEMA3DO95025 777 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 ALDOCP09972 364 aaKnown RBP18.11■□□□□ 0.49
SMPD1-205ENST00000531303 CCL4P13236 92 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 SSR2P43308 183 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 DIO3P55073 304 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 NME5P56597 212 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 EMX2Q04743 252 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 TGM3Q08188 693 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 KIAA0040Q15053 153 aa18.11■□□□□ 0.49
SMPD1-205ENST00000531303 OR4C11Q6IEV9 310 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms