RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 COQ6Q9Y2Z9 468 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 K7ESM1 405 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 LZTS3O60299 673 aaPredicted RBP16.52■□□□□ 0.24
BRCA2-204ENST00000530893 TNFRSF21O75509 655 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 CLPXO76031 633 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 NFATC1O95644 943 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 NTRK1P04629 796 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 MVDP53602 400 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 GP2P55259 537 aaKnown RBP16.52■□□□□ 0.24
BRCA2-204ENST00000530893 HBA1P69905 142 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 NPRL3Q12980 569 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 BNIP3Q12983 259 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 RPA4Q13156 261 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 LAPTM4AQ15012 233 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 MAD2L1BPQ15013 274 aaPredicted RBP16.52■□□□□ 0.24
BRCA2-204ENST00000530893 TCEAL5Q5H9L2 206 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 CRTC3Q6UUV7 619 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 XKR5Q6UX68 686 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 LINC00299Q6ZSB3 139 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 SVOPQ8N4V2 548 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 FAR1Q8WVX9 515 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 IPCEF1Q8WWN9 437 aaPredicted RBP16.52■□□□□ 0.24
BRCA2-204ENST00000530893 RORBQ92753 470 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 TANKQ92844 425 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF707Q96C28 371 aaPredicted RBP16.52■□□□□ 0.24
BRCA2-204ENST00000530893 GABARAPL3Q9BY60 117 aa16.52■□□□□ 0.24
BRCA2-204ENST00000530893 PRRT4C9JH25 899 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 XPNPEP2O43895 674 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 SH3BGRLO75368 114 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 POP7O75817 140 aaKnown RBP16.52■□□□□ 0.23
BRCA2-204ENST00000530893 EFNA1P20827 205 aaPredicted RBP16.52■□□□□ 0.23
BRCA2-204ENST00000530893 HTR1BP28222 390 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 CRATP43155 626 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 CAMK2GQ13555 558 aaPredicted RBP16.52■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF385BQ569K4 471 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 GCNT6Q5T4J0 391 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 FAM71E1Q6IPT2 247 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 LCTLQ6UWM7 567 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 SLC16A12Q6ZSM3 486 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 CCDC80Q76M96 950 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 ERN2Q76MJ5 926 aaKnown RBP16.52■□□□□ 0.23
BRCA2-204ENST00000530893 TRIM74Q86UV6 250 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF547Q8IVP9 402 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 MIPOL1Q8TD10 442 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 C16orf78Q8WTQ4 265 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 MAL2Q969L2 176 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 NXPE3Q969Y0 559 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 RAD51AP1Q96B01 352 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 SAMD11Q96NU1 681 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 CSF3RQ99062 836 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 SLC35A5Q9BS91 424 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 RUBCNLQ9H714 662 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 DYRK4Q9NR20 520 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 EXD2Q9NVH0 621 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 CXXC1Q9P0U4 656 aaPredicted RBP16.52■□□□□ 0.23
BRCA2-204ENST00000530893 DEC1Q9P2X7 70 aa16.52■□□□□ 0.23
BRCA2-204ENST00000530893 DENND4AQ7Z401 1863 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 MUC22E2RYF6 1773 aaPredicted RBP16.51■□□□□ 0.23
BRCA2-204ENST00000530893 TMEM229AB2RXF0 380 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 CYP4B1P13584 511 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 ACVR2AP27037 513 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 PXNP49023 591 aaPredicted RBP16.51■□□□□ 0.23
BRCA2-204ENST00000530893 PIGFQ07326 219 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 C2orf80Q0P641 193 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 NPTX1Q15818 432 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 KRT78Q8N1N4 520 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 PHOSPHO2Q8TCD6 241 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 HRASLS5Q96KN8 279 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 GPATCH2Q9NW75 528 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 TAS2R9Q9NYW1 312 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 SH2B3Q9UQQ2 575 aa16.51■□□□□ 0.23
BRCA2-204ENST00000530893 A8MVJ9 347 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PFDN1O60925 122 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 BCAS1O75363 584 aaPredicted RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 GCM2O75603 506 aaPredicted RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 INMTO95050 263 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 GABARAPO95166 117 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TGFB1P01137 390 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 IFNA14P01570 189 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ITGA2P17301 1181 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 KELP23276 732 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 METAP1P53582 386 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 C21orf59P57076 290 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 HTRA3P83110 453 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TSTA3Q13630 321 aaPredicted RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF630Q2M218 657 aaPredicted RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 IFI44LQ53G44 452 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PRAMEF14Q5SWL7 426 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 SYT6Q5T7P8 510 aaPredicted RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PRAMEF13Q5VWM6 474 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ANGPTL8Q6UXH0 198 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TMIGD1Q6UXZ0 262 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 SLC30A8Q8IWU4 369 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 OR4K1Q8NGD4 311 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TRUB1Q8WWH5 349 aaKnown RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 RAB7BQ96AH8 199 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ZDHHC5Q9C0B5 715 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 C1GALT1Q9NS00 363 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms