RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 GPX6P59796 221 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 CDKL1Q00532 357 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 REEP5Q00765 189 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 IRF8Q02556 426 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 RELAQ04206 551 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TGM3Q08188 693 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TRADDQ15628 312 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 NSDHLQ15738 373 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 PDK4Q16654 411 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 C18orf21Q32NC0 220 aaPredicted RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 PRR30Q53SZ7 412 aaPredicted RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 PAGE2BQ5JRK9 111 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 FHL5Q5TD97 284 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 MROH9Q5TGP6 573 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ABHD17BQ5VST6 288 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 SULT1C3Q6IMI6 304 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TMEM214Q6NUQ4 689 aaKnown RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ZDHHC24Q6UX98 284 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 RBMXL3Q8N7X1 1067 aaKnown RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 CEP112Q8N8E3 955 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 AMER3Q8N944 861 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ZNF740Q8NDX6 193 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TTLQ8NG68 377 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 UHMK1Q8TAS1 419 aaKnown RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 STAG3L4Q8TBR4 150 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ESAMQ96AP7 390 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 PDLIM5Q96HC4 596 aaKnown RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 OR4K3Q96R72 315 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 CYTH2Q99418 400 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 LPAR4Q99677 370 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TUBB6Q9BUF5 446 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TSPYL1Q9H0U9 437 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 SYNPO2LQ9H987 977 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 NMRAL1Q9HBL8 299 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 LRRC4CQ9HCJ2 640 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 NUDT4Q9NZJ9 180 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 OPTCQ9UBM4 332 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ZFP69BQ9UJL9 534 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 COPG1Q9Y678 874 aaKnown RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 SCN2AQ99250 2005 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 KCNE1BA0A087WTH5 132 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 A0A087X1B8 175 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 IGHV1-45A0A0A0MS14 117 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 SYCE1LA8MT33 242 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PCDH17O14917 1159 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ERI3O43414 337 aaKnown RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ONECUT2O95948 504 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 B3GALT4O96024 378 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 C1GALT1C1LP0DN25 315 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 COX6A1P12074 109 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 AHRP35869 848 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 SCTRP47872 440 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 SERPINB8P50452 374 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 BTN3A2P78410 334 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PHEXP78562 749 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PWP1Q13610 501 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 DDX39BQ13838 428 aaKnown RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ZNF169Q14929 603 aaPredicted RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ABRAXAS2Q15018 415 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 TLR1Q15399 786 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PPP1R3AQ16821 1122 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 FAM83EQ2M2I3 478 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 CRB2Q5IJ48 1285 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 TRIM40Q6P9F5 258 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PAPD4Q6PIY7 484 aaKnown RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 FAM180AQ6UWF9 173 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 TMIGD1Q6UXZ0 262 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 LANCL3Q6ZV70 420 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 CPEB2Q7Z5Q1 589 aaKnown RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ABHD11Q8NFV4 315 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 OR5T3Q8NGG3 340 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 OR1N1Q8NGS0 311 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PPP4R1Q8TF05 950 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ANKRD7Q92527 254 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ATP6V1E2Q96A05 226 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 MIB2Q96AX9 1013 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 TBC1D20Q96BZ9 403 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 RHBDF1Q96CC6 855 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 MOCOSQ96EN8 888 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 PTCHD1Q96NR3 888 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 VN1R1Q9GZP7 353 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 SPNS1Q9H2V7 528 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 CPSF2Q9P2I0 782 aaKnown RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 MRPS33Q9Y291 106 aaKnown RBP8.58□□□□□ -1.04
CMTM1-210ENST00000528441 ACOT9Q9Y305 439 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 SPACA6W5XKT8 324 aa8.58□□□□□ -1.04
CMTM1-210ENST00000528441 IGLV3-12A0A075B6K2 115 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 A0A096LPK6 155 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 A8MUA0 341 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 UBXN8O00124 270 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 TP73O15350 636 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 CHST10O43529 356 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 B3GALT2O43825 422 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 SH3BGRLO75368 114 aa8.57□□□□□ -1.04
CMTM1-210ENST00000528441 SERPINA7P05543 415 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms