RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 M0R296 226 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 NR5A2O00482 541 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 TTI1O43156 1089 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 LETM1O95202 739 aaPredicted RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 GAS8O95995 478 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 IGHEP01854 428 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 GSTA2P09210 222 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 CFC1P0CG37 223 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 UROSP10746 265 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 KRT3P12035 628 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 GOT1P17174 413 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 DUTP33316 252 aaKnown RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 SOX3P41225 446 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 OR3A2P47893 321 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 GUCY2DQ02846 1103 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 SLC3A1Q07837 685 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 HYAL1Q12794 435 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 RPS6KA1Q15418 735 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 TAB1Q15750 504 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 MAPK11Q15759 364 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 DUSP5Q16690 384 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 C2orf76Q3KRA6 126 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 ATP1A1-AS1Q5TC04 95 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 GFI1BQ5VTD9 330 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 OR4C11Q6IEV9 310 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 SLC27A4Q6P1M0 643 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 TRIM65Q6PJ69 517 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 ZER1Q7Z7L7 766 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 KLHDC8AQ8IYD2 350 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 SMYD1Q8NB12 490 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 SPC24Q8NBT2 197 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 SNRNP40Q96DI7 357 aaKnown RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 OMA1Q96E52 524 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 ZNF486Q96H40 463 aaPredicted RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 ART5Q96L15 291 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 NEDD4LQ96PU5 975 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 USP28Q96RU2 1077 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 LITAFQ99732 161 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 UBAC1Q9BSL1 405 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 TRIM7Q9C029 511 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 MTIF3Q9H2K0 278 aaKnown RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 MTHFD2LQ9H903 347 aaPredicted RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 RNPEPL1Q9HAU8 725 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 C3orf14Q9HBI5 128 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 SPHK2Q9NRA0 654 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 CWC25Q9NXE8 425 aaPredicted RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 SPG21Q9NZD8 308 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 CNIH4Q9P003 139 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 KLHL8Q9P2G9 620 aaPredicted RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 DBF4Q9UBU7 674 aaPredicted RBP3.42□□□□□ -1.86
SKP1-212ENST00000523966 ANGPTL3Q9Y5C1 460 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 CLIP1P30622 1438 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 RAD54L2Q9Y4B4 1467 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 WDR62O43379 1518 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 A0A0U1RQG5 324 aaPredicted RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 A0A1W2PRV1 198 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 ANTXRLA6NF34 631 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 NKX6-3A6NJ46 265 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 CACNB4O00305 520 aaPredicted RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 SURF4O15260 269 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 SAP30O75446 220 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 CLN5O75503 358 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 BAG2O95816 211 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 MT-ND2P03891 347 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 SBK2P0C263 348 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 VDRP11473 427 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 CD59P13987 128 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 ZNF26P17031 533 aaPredicted RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 PRKACGP22612 351 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 SERPINB6P35237 376 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 MMP12P39900 470 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 OR3A1P47881 315 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 KHKP50053 298 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 CRIP2P52943 208 aaPredicted RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 ATP12AP54707 1039 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 NME5P56597 212 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 HUNKP57058 714 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 CYCSP99999 105 aaKnown RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 TMEM187Q14656 261 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 IFI44LQ53G44 452 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 TCEAL6Q6IPX3 200 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 KLHL10Q6JEL2 608 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 ADAM5Q6NVV9 412 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 TMEM270Q6UE05 265 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 RFPL4BQ6ZWI9 263 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 TRMT11Q7Z4G4 463 aaKnown RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 AQP12AQ8IXF9 295 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 THEM5Q8N1Q8 247 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 ELMOD1Q8N336 334 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 TMEM99Q8N816 258 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 AMER3Q8N944 861 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 RNF149Q8NC42 400 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 LPCAT1Q8NF37 534 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 SEPT8Q92599 483 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 PTP4A1Q93096 173 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 RFT1Q96AA3 541 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 ULK4Q96C45 1275 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms