RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 COLQQ9Y215 455 aaPredicted RBP16.12■□□□□ 0.17
SREK1-212ENST00000522912 MDC1Q14676 2089 aaKnown RBP16.12■□□□□ 0.17
SREK1-212ENST00000522912 GOLGA4Q13439 2230 aaKnown RBP16.12■□□□□ 0.17
SREK1-212ENST00000522912 TRBV23OR9-2A0A075B6M9 112 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 C1orf226A1L170 272 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 A6NCN8 305 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 RNASET2O00584 256 aaKnown RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 SOCS2O14508 198 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 DENRO43583 198 aaKnown RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 CREG1O75629 220 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 IL3P08700 152 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 UBTFL6P0CB48 400 aaPredicted RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 FCGR1AP12314 374 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 GPX2P18283 190 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 SERPINB1P30740 379 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 CCR5P51681 352 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 NKG7Q16617 165 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 R3HCC1LQ7Z5L2 792 aaKnown RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 ADGRF3Q8IZF5 1079 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 SLC22A18ASQ8N1D0 253 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 CLEC4FQ8N1N0 589 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 FBXL6Q8N531 539 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 VPS37AQ8NEZ2 397 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 FBXO30Q8TB52 745 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 NETO1Q8TDF5 533 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 CREB3L4Q8TEY5 395 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 FAM162AQ96A26 154 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 TRBC2A0A5B9 178 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 ARHGAP10A1A4S6 786 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 CHURC1-FNTBB4DL54 471 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 PRAMEF26H0Y7S4 382 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 ZCCHC18P0CG32 403 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 SLC19A1P41440 591 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 GAB1Q13480 694 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 ATP6AP1Q15904 470 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 CCNYL2Q5T2Q4 361 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 PPP4R4Q6NUP7 873 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 ZBTB49Q6ZSB9 765 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 UBE3DQ7Z6J8 389 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 SERPINA11Q86U17 422 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 OR2L3Q8NG85 312 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 OR4E2Q8NGC2 313 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 CIDECQ96AQ7 238 aaPredicted RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 PPCDCQ96CD2 204 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 ZNF597Q96LX8 424 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 AICDAQ9GZX7 198 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 TPT1P8Q9HAU6 139 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 WSB2Q9NYS7 404 aaPredicted RBP16.11■□□□□ 0.17
SREK1-212ENST00000522912 SPASTQ9UBP0 616 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 AP4B1Q9Y6B7 739 aa16.11■□□□□ 0.17
SREK1-212ENST00000522912 H0YJX3 145 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 NDUFS4O43181 175 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 KCNK5O95279 499 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 RAP2AP10114 183 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 HOXB3P14651 431 aaPredicted RBP16.1■□□□□ 0.17
SREK1-212ENST00000522912 BCL6P41182 706 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 C6orf52Q5T4I8 152 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
SREK1-212ENST00000522912 OR4A15Q8NGL6 344 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 LCN9Q8WX39 176 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 HLA-CQ95604 372 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 NCLNQ969V3 563 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 GPR174Q9BXC1 333 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 DCAF13Q9NV06 445 aaKnown RBP16.1■□□□□ 0.17
SREK1-212ENST00000522912 TMEM184CQ9NVA4 438 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 TRNAU1APQ9NX07 287 aaKnown RBP16.1■□□□□ 0.17
SREK1-212ENST00000522912 DUSP12Q9UNI6 340 aa16.1■□□□□ 0.17
SREK1-212ENST00000522912 A0A1W2PPC1 479 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 MAGEA13PA6NCF6 341 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 PDLIM1O00151 329 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 ACOX3O15254 700 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 RETP07949 1114 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 NDUFS1P28331 727 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 RPL3P39023 403 aaKnown RBP16.09■□□□□ 0.17
SREK1-212ENST00000522912 RABIFP47224 123 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 HSPA13P48723 471 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 HBA1P69905 142 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 ABATP80404 500 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 MRPS35P82673 323 aaKnown RBP16.09■□□□□ 0.17
SREK1-212ENST00000522912 FZD5Q13467 585 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 MAP7Q14244 749 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 LRRC32Q14392 662 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 FAM98BQ52LJ0 330 aaKnown RBP16.09■□□□□ 0.17
SREK1-212ENST00000522912 KIAA1614Q5VZ46 1190 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 IKBIPQ70UQ0 350 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 AMIGO1Q86WK6 493 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 PTOV1Q86YD1 416 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 ZZZ3Q8IYH5 903 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 GOT1L1Q8NHS2 421 aaPredicted RBP16.09■□□□□ 0.17
SREK1-212ENST00000522912 ZFP90Q8TF47 636 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 TM4SF18Q96CE8 201 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 MTERF3Q96E29 417 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 DPH7Q9BTV6 452 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 TCEAL2Q9H3H9 227 aaPredicted RBP16.09■□□□□ 0.17
SREK1-212ENST00000522912 BATF3Q9NR55 127 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 AASDHPPTQ9NRN7 309 aa16.09■□□□□ 0.17
SREK1-212ENST00000522912 ATAD3AQ9NVI7 634 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms