RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 hCG_38984A0A1B0GV85 526 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 ILVBLA1L0T0 632 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 MPTX1A8MV57 137 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 H0Y626 953 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 SLC30A4O14863 429 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 CRCPO75575 148 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 CEACAM4O75871 244 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 RPLP0P05388 317 aaKnown RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 AOC1P19801 751 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 CTNNA2P26232 953 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 OR3A1P47881 315 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 OR3A3P47888 321 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 GSCP56915 257 aaPredicted RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 CALCOCO2Q13137 446 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 NFE2L1Q14494 772 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 PPA1Q15181 289 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 C2CD6Q53TS8 623 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 ARMCX4Q5H9R4 360 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 GBP6Q6ZN66 633 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 OTOAQ7RTW8 1153 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 ANKRD23Q86SG2 305 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 ZC3H3Q8IXZ2 948 aaKnown RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 ZNF440Q8IYI8 595 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 CCDC185Q8N715 623 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 NKAIN3Q8N8D7 197 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 C11orf45Q8TAV5 145 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 CHURC1Q8WUH1 139 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 CASP10Q92851 521 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 HNRNPABQ99729 332 aaKnown RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 ATG101Q9BSB4 218 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 MLPHQ9BV36 600 aaPredicted RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 IDI2Q9BXS1 227 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 MTIF3Q9H2K0 278 aaKnown RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 CUEDC2Q9H467 287 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 NLGN3Q9NZ94 848 aa4.33□□□□□ -1.72
SKP1-208ENST00000521216 DBF4Q9UBU7 674 aaPredicted RBP4.33□□□□□ -1.72
SKP1-208ENST00000521216 SPATA31D1Q6ZQQ2 1576 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 SNED1Q8TER0 1413 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 RNF123Q5XPI4 1314 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 A0A0B4J203 849 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 TFECO14948 347 aaPredicted RBP4.32□□□□□ -1.72
SKP1-208ENST00000521216 MLNRO43193 412 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ECE2O60344 883 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 TGDSO95455 350 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ITIH1P19827 911 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 GIFP27352 417 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ANKRD20A4Q4UJ75 823 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ANKRD20A8PQ5CZ79 823 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ANKRD20A2Q5SQ80 823 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ANKRD20A1Q5TYW2 823 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 ANKRD20A3Q5VUR7 823 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 PM20D1Q6GTS8 502 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 KLHL10Q6JEL2 608 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 PODNL1Q6PEZ8 512 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 C15orf52Q6ZUT6 534 aaKnown RBP4.32□□□□□ -1.72
SKP1-208ENST00000521216 TDHQ8IZJ6 230 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 Q8NBF4 154 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 OR52B6Q8NGF0 335 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 CKAP2Q8WWK9 683 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 GTF3AQ92664 365 aaKnown RBP4.32□□□□□ -1.72
SKP1-208ENST00000521216 PKP2Q99959 881 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 OVOL2Q9BRP0 275 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 LRRC61Q9BV99 259 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 TMEM206Q9H813 350 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 SRD5A3Q9H8P0 318 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 TUFT1Q9NNX1 390 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 TMEM161AQ9NX61 479 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 NDE1Q9NXR1 346 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 MUTYHQ9UIF7 546 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 MOB4Q9Y3A3 225 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 WIPI2Q9Y4P8 454 aa4.32□□□□□ -1.72
SKP1-208ENST00000521216 LOC105371242A0A075B767 164 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 A4D1N5 150 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 STX6O43752 255 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 LRCH4O75427 683 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 RAD51DO75771 328 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 C4BPBP20851 252 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 SLC1A3P43003 542 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 AKAP17AQ02040 695 aaKnown RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 ZNF177Q13360 481 aaPredicted RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 NFATC2Q13469 925 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 MAPK11Q15759 364 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 ZNF770Q6IQ21 691 aaPredicted RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 FBXL22Q6P050 247 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 SLC27A4Q6P1M0 643 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 C17orf107Q6ZR85 190 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 Q71RC1 249 aaPredicted RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 SLC22A15Q8IZD6 547 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 SYCP3Q8IZU3 236 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 TEX26Q8N6G2 289 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 GDAP1Q8TB36 358 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 RFT1Q96AA3 541 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 PRICKLE1Q96MT3 831 aaPredicted RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 PRMT1Q99873 361 aaKnown RBP4.31□□□□□ -1.72
SKP1-208ENST00000521216 C17orf62Q9BQA9 187 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 SLC39A8Q9C0K1 460 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 SLCO1C1Q9NYB5 712 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
SKP1-208ENST00000521216 GPR132Q9UNW8 380 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms