RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CD48P09326 243 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 RHOXF2BP0C7M4 288 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PATE4P0C8F1 98 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CSH1P0DML2 217 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CSH2P0DML3 217 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 HMGA1P17096 107 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 KDELR1P24390 212 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CHATP28329 748 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CDKN2BP42772 138 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 HTR3AP46098 478 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 HOXA1P49639 335 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 LUMP51884 338 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 LMO4P61968 165 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 DYNLT1P63172 113 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 MRPS25P82663 173 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 GRIK2Q13002 908 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PLD1Q13393 1074 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 SNX1Q13596 522 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PDK2Q15119 407 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CTF1Q16619 201 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CA9Q16790 459 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 TFDP3Q5H9I0 405 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PPM1LQ5SGD2 360 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 ERMARDQ5T6L9 678 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CCDC70Q6NSX1 233 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CYP4V2Q6ZWL3 525 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 DNAJB7Q7Z6W7 309 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 TAC4Q86UU9 113 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 ITIH5Q86UX2 942 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PYROXD2Q8N2H3 581 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 ELMOD1Q8N336 334 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 MMGT1Q8N4V1 131 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CCDC185Q8N715 623 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PRELID2Q8N945 189 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 NOA1Q8NC60 698 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 TEKT4Q8WW24 435 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 MAIP1Q8WWC4 291 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 C1orf54Q8WWF1 131 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 RND1Q92730 232 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CASP10Q92851 521 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 SNAPC3Q92966 411 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 ABTB1Q969K4 478 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 NT5C3BQ969T7 300 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 MAGOHBQ96A72 148 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 RNFT2Q96EX2 444 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 RPGRIP1Q96KN7 1286 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CEP295NLQ96MC4 621 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 KRT12Q99456 494 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 RHOXF2Q9BQY4 288 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 HERPUD2Q9BSE4 406 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 SNRNP25Q9BV90 132 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 CALN1Q9BXU9 219 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 OSBPL8Q9BZF1 889 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 NACA2Q9H009 215 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 TKTL2Q9H0I9 626 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 ZNF700Q9H0M5 742 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 G6PC2Q9NQR9 355 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 OLA1Q9NTK5 396 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 PIGVQ9NUD9 493 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CLIC5Q9NZA1 410 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 OGFRQ9NZT2 677 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 RASAL2Q9UJF2 1139 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 PADI1Q9ULC6 663 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 TTC7AQ9ULT0 858 aaPredicted RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 R3HDM2Q9Y2K5 976 aaKnown RBP3.83□□□□□ -1.8
CLK4-207ENST00000520909 ASB3Q9Y575 518 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 SNX10Q9Y5X0 201 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CHD9Q3L8U1 2897 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 CHD7Q9P2D1 2997 aa3.83□□□□□ -1.8
CLK4-207ENST00000520909 hCG_1818297A0A087WSY0 165 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 FAM92AA1XBS5 289 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 ZNF840PA6NDX5 716 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CCDC188H7C350 402 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 EEF2KO00418 725 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 PER2O15055 1255 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 IRAK2O43187 625 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 COCHO43405 550 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CREB3O43889 395 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CST8O60676 142 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 MOCS2O96007 188 aaPredicted RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 IGLV3-25P01717 112 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 APOEP02649 317 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 ZDHHC11BP0C7U3 371 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 SLC2A3P11169 496 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 PCNAP12004 261 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 EPCAMP16422 314 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 NR1D1P20393 614 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 ITGAXP20702 1163 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CCR1P32246 355 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 ATP5C1P36542 298 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 COILP38432 576 aaPredicted RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 KCNJ1P48048 391 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 ARSEP51690 589 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CLCN4P51793 760 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 NR1H2P55055 460 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 SEC61BP60468 96 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 CAMK1Q14012 370 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TFDP2Q14188 446 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 DPYSL3Q14195 570 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms