RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ZPBPQ9BS86 351 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 TRIM7Q9C029 511 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 NUAK2Q9H093 628 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 STN1Q9H668 368 aaKnown RBP5.69□□□□□ -1.5
PABPC1-216ENST00000520868 NT5MQ9NPB1 228 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 FBXO8Q9NRD0 319 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 PARVAQ9NVD7 372 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 ARL8BQ9NVJ2 186 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 CNOT8Q9UFF9 292 aaKnown RBP5.69□□□□□ -1.5
PABPC1-216ENST00000520868 TBC1D29Q9UFV1 150 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 KCNK6Q9Y257 313 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 TMEM184BQ9Y519 407 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-216ENST00000520868 RPS6KL1Q9Y6S9 549 aa5.69□□□□□ -1.5
PABPC1-216ENST00000520868 UTP20O75691 2785 aaKnown RBP5.69□□□□□ -1.5
PABPC1-216ENST00000520868 RP1L1Q8IWN7 2480 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-216ENST00000520868 USP9XQ93008 2570 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-216ENST00000520868 A0A0J9YYE9 177 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 LRCH4O75427 683 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 CLDN7O95471 211 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 TRBC1P01850 177 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 KRT7P08729 469 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 CCDC172P0C7W6 258 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ACP5P13686 325 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 TCF4P15884 667 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 FERP16591 822 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 GNLYP22749 145 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 GALNSP34059 522 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 THBS4P35443 961 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 UQCRFS1P47985 274 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 GFERP55789 205 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 DPYSQ14117 519 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 SMTNL2Q2TAL5 461 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 MARC1Q5VT66 337 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 AWAT2Q6E213 333 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 PLEKHA7Q6IQ23 1121 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 MRNIPQ6NTE8 343 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 WDR74Q6RFH5 385 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-216ENST00000520868 TMCO3Q6UWJ1 677 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ASB18Q6ZVZ8 466 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 CYP4V2Q6ZWL3 525 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-216ENST00000520868 IRF2BP2Q7Z5L9 587 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 TMEM135Q86UB9 458 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 SLC9B2Q86UD5 537 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ANKRD13BQ86YJ7 626 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 CCDC13Q8IYE1 715 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ATPAF2Q8N5M1 289 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 EXD1Q8NHP7 514 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 SH3KBP1Q96B97 665 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 COX14Q96I36 57 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 MCCC1Q96RQ3 725 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-216ENST00000520868 MGME1Q9BQP7 344 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ULBP3Q9BZM4 244 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ZWILCHQ9H900 591 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 ARFGAP3Q9NP61 516 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 PRDM8Q9NQV8 689 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 SEMA5BQ9P283 1151 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 MYO1AQ9UBC5 1043 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 PPIL1Q9Y3C6 166 aa5.68□□□□□ -1.5
PABPC1-216ENST00000520868 SPTBN1Q01082 2364 aaKnown RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 MKRN2OSH3BPM6 223 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 KIF1CO43896 1103 aaKnown RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 CNOT3O75175 753 aaKnown RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 KIAA0754O94854 1291 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 VIPP01282 170 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 PYGLP06737 847 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 F3P13726 295 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 PRF1P14222 555 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 AMD1P17707 334 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 STC1P52823 247 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 CDH6P55285 790 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 IHHQ14623 411 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 KPNB1Q14974 876 aaKnown RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 BOLA3Q53S33 107 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 FHL5Q5TD97 284 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 ABLIM2Q6H8Q1 611 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 TLDC1Q6P9B6 456 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 PSTKQ8IV42 348 aaKnown RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 RASGRP3Q8IV61 690 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 NRACQ8N912 160 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 LPCAT1Q8NF37 534 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 ANKRD20A12PQ8NF67 263 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 STAMBPL1Q96FJ0 436 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 LRRC46Q96FV0 321 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 C9orf72Q96LT7 481 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 TGM7Q96PF1 710 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 CSPG4P5Q96PW8 444 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 OR6C1Q96RD1 312 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 WDR24Q96S15 920 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 TWSG1Q9GZX9 223 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 ATXN10Q9UBB4 475 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 PLEKHB1Q9UF11 243 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 LIMA1Q9UHB6 759 aaKnown RBP5.67□□□□□ -1.5
PABPC1-216ENST00000520868 LNPEPQ9UIQ6 1025 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 VPS4AQ9UN37 437 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 CHKBQ9Y259 395 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 TTLL3Q9Y4R7 772 aa5.67□□□□□ -1.5
PABPC1-216ENST00000520868 ICE1Q9Y2F5 2266 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms