RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SERTAD3Q9UJW9 196 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 FIS1Q9Y3D6 152 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 A0A0G2JN53 185 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 TCP11X1B4DZS4 312 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 NPIPB8E9PQR5 432 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SAP18O00422 153 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 RTCAO00442 366 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 PLPP1O14494 284 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 PIP5K1BO14986 540 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 NVLO15381 856 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 BRINP1O60477 761 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SCRG1O75711 98 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 KIAA0754O94854 1291 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ONECUT2O95948 504 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SERPIND1P05546 499 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 JMJD7P0C870 316 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ZNF888P0CJ79 500 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 NEFHP12036 1026 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 GSTM2P28161 218 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 HMOX2P30519 316 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SLC5A2P31639 672 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 BSGP35613 385 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 RAB15P59190 212 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 HMGCS1Q01581 520 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 BTKQ06187 659 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 TBL3Q12788 808 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 IFT88Q13099 833 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 GRM7Q14831 915 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 MANEAQ5SRI9 462 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 DCAF12Q5T6F0 453 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 KHDRBS2Q5VWX1 349 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 CGB2Q6NT52 195 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 RHBDD2Q6NTF9 364 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 TLDC1Q6P9B6 456 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ABHD17CQ6PCB6 329 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 CEACAM20Q6UY09 585 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ZNF517Q6ZMY9 492 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 COX15Q7KZN9 410 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 BPHLQ86WA6 291 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 ZCCHC10Q8TBK6 192 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 LRRC8CQ8TDW0 803 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 TWIST2Q8WVJ9 160 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 DYDC1Q8WWB3 177 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SELENOMQ8WWX9 145 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SREK1Q8WXA9 508 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 UBE2E3Q969T4 207 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 RERGQ96A58 199 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 CMTM7Q96FZ5 175 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 MAGEB10Q96LZ2 347 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 C7orf26Q96N11 449 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 GBP5Q96PP8 586 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ZNF317Q96PQ6 595 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 TEFMQ96QE5 360 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 B3GNT4Q9C0J1 378 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ILKAPQ9H0C8 392 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 ELOVL6Q9H5J4 265 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 EML4Q9HC35 981 aaKnown RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 CUTCQ9NTM9 273 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 AKAP7Q9P0M2 348 aaPredicted RBP9.39□□□□□ -0.91
CLN8-202ENST00000517514 GIMAP2Q9UG22 337 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 ADGRE2Q9UHX3 823 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SNX6Q9UNH7 406 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 SLC22A7Q9Y694 548 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 NCOR2Q9Y618 2525 aa9.39□□□□□ -0.91
CLN8-202ENST00000517514 PCSK5Q92824 1860 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 CELSR3Q9NYQ7 3312 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 A0A0A6YYC8 382 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 I3L1I5 382 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 SDHDO14521 159 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 DSCR3O14972 297 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 MAP3K7O43318 606 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 EDF1O60869 148 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 CNOT3O75175 753 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 ULK1O75385 1050 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 EEDO75530 441 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 SKAP2O75563 359 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 STK17BO94768 372 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 KRT6AP02538 564 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 KRT6BP04259 564 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 LINC00032P0C843 101 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 IL1RNP18510 177 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 PTX3P26022 381 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 SERPINB1P30740 379 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 OR1D4P47884 311 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 KRT6CP48668 564 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 RPL14P50914 215 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 EFNA3P52797 238 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 RAB8AP61006 207 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 RAE1P78406 368 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 SHC2P98077 582 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 ZNF33BQ06732 778 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 CSTF3Q12996 717 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 CUL3Q13618 768 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 RUNX2Q13950 521 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 FAM53BQ14153 422 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 KIAA0040Q15053 153 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms