RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 RPS19BP1Q86WX3 136 aaKnown RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CCDC71Q8IV32 467 aaPredicted RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RASGEF1CQ8N431 466 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 C2CD4AQ8NCU7 369 aaPredicted RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MCUQ8NE86 351 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 OR52N2Q8NGI0 321 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 OR56A3Q8NH54 315 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 UTP15Q8TED0 518 aaKnown RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RERGQ96A58 199 aaPredicted RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ZNF354BQ96LW1 612 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 IARS2Q9NSE4 1012 aaKnown RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 C20orf96Q9NUD7 363 aaPredicted RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 INTS10Q9NVR2 710 aaKnown RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TRMT1Q9NXH9 659 aaKnown RBP7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TNFRSF10DQ9UBN6 386 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PSAT1Q9Y617 370 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SLC22A7Q9Y694 548 aa7.74□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FN1P02751 2386 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 A0A0G2JN53 185 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 A0A1B0GTH9 108 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TCRBV16S1A1N1A0A5B0 115 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CTAGE9A4FU28 777 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NKX2-6A6NCS4 301 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MAGEB17A8MXT2 336 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 KDM4EB2RXH2 506 aaPredicted RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SLC25A12O75746 678 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TOXO94900 526 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 IPO7O95373 1038 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CLDN14O95500 239 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CRYABP02511 175 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 COX6B1P14854 86 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CDC25BP30305 580 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TRHRP34981 398 aaPredicted RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PTGER4P35408 488 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HSD17B2P37059 387 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HNF4AP41235 474 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 AVPR1BP47901 424 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ITGA8P53708 1063 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 DLX5P56178 289 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RPS15AP62244 130 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CDK16Q00536 496 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ALDH6A1Q02252 535 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SNTB1Q13884 538 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ZNF460Q14592 562 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CYP1B1Q16678 543 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PPP1R3AQ16821 1122 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HP1BP3Q5SSJ5 553 aaPredicted RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RNF187Q5TA31 235 aaPredicted RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RNASEH2BQ5TBB1 312 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 THEMIS2Q5TEJ8 643 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MFSD4BQ5TF39 518 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RTL6Q6ICC9 239 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CASC4Q6P4E1 433 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 XKRXQ6PP77 449 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 LCTLQ6UWM7 567 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 RPTNQ6XPR3 784 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 GSTA5Q7RTV2 222 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 LIX1LQ8IVB5 337 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SULF2Q8IWU5 870 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 GSDMBQ8TAX9 411 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MAGEC3Q8TD91 643 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ANKRD49Q8WVL7 239 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NEIL2Q969S2 332 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TBC1D20Q96BZ9 403 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SNF8Q96H20 258 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SPOCK3Q9BQ16 436 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 UTP23Q9BRU9 249 aaKnown RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SLC6A16Q9GZN6 736 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 LIME1Q9H400 295 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 SEMA4BQ9NPR2 832 aaPredicted RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CCDC177Q9NQR7 707 aaPredicted RBP7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FAM114A2Q9NRY5 505 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PLSCR2Q9NRY7 297 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ZFATQ9P243 1243 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 LRFN1Q9P244 771 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 LIPGQ9Y5X9 500 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FBN3Q75N90 2809 aa7.73□□□□□ -1.17
SCARNA20.3-201ENST00000516913 STAB1Q9NY15 2570 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MED12Q93074 2177 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 E5RI56 91 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 F8W8V4 182 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CDC7O00311 574 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NDC80O14777 642 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 FANCGO15287 622 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 TTI1O43156 1089 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 NDUFS4O43181 175 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 OR1F1O43749 312 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ZBTB14O43829 449 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HS6ST1O60243 411 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 PDE9AO76083 593 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 WISP3O95389 354 aaPredicted RBP7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 CELA3AP09093 270 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 MLNP12872 115 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ICAM2P13598 275 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ENO3P13929 434 aaPredicted RBP7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 ALOX12P18054 663 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 EPORP19235 508 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 AGAP20933 346 aa7.72□□□□□ -1.17
SCARNA20.3-201ENST00000516913 HNRNPH1P31943 449 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms