RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 RHOBTB2Q9BYZ6 727 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 TMEM39BQ9GZU3 492 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 LIME1Q9H400 295 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 NOX3Q9HBY0 568 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 RAVER2Q9HCJ3 691 aaKnown RBP-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 C20orf141Q9NUB4 165 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 HSPB7Q9UBY9 170 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 FBXL4Q9UKA2 621 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 ANGPTL2Q9UKU9 493 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 SCML2Q9UQR0 700 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF148Q9UQR1 794 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 KLHDC2Q9Y2U9 406 aa-1.53□□□□□ -2.65
RNU6-539P-201ENST00000516665 PTPRZ1P23471 2315 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SF3B1O75533 1304 aaKnown RBP eCLIP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 AQP12BA6NM10 295 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 B4DLN1 442 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC1A7O00341 560 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 HCRTO43612 131 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 TNNT1P13805 278 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 GLRA1P23415 457 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 STT3AP46977 705 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 NPBWR1P48145 328 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 NT5C2P49902 561 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 KLHL30Q0D2K2 578 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 GAGE2BQ13066 116 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 NONOQ15233 471 aaKnown RBP eCLIP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPP1R3AQ16821 1122 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 KRTAP19-7Q3SYF9 63 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 COX19Q49B96 90 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 GAGE2EQ4V326 116 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC35D3Q5M8T2 416 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM120AOSQ5T036 256 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF684Q5T5D7 378 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 GAGE2AQ6NT46 116 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SPATA8Q6RVD6 105 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 FCRLAQ7L513 359 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 CCDC190Q86UF4 302 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC44A2Q8IWA5 706 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM114A1Q8IWE2 563 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 AFAP1Q8N556 730 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZSCAN4Q8NAM6 433 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF527Q8NB42 609 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNRF1Q8ND25 227 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR7A2PQ8NGA2 310 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 STYXQ8WUJ0 223 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 BLNKQ8WV28 456 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 CHMP4CQ96CF2 233 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 RNF185Q96GF1 192 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR5M11Q96RB7 305 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 NABP2Q9BQ15 211 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 C19orf24Q9BVV8 132 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 EHD1Q9H4M9 534 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM204AQ9H8W3 233 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SAYSD1Q9NPB0 183 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 MMP26Q9NRE1 261 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 TM7SF3Q9NS93 570 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 IL1RAPL1Q9NZN1 696 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 RCOR3Q9P2K3 495 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC25A10Q9UBX3 287 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 GAGE2DQ9UEU5 116 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 CDH9Q9ULB4 789 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 CCPG1Q9ULG6 757 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 MGAT4AQ9UM21 535 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 GDAQ9Y2T3 454 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPIAL4AQ9Y536 164 aa-1.54□□□□□ -2.66
RNU6-539P-201ENST00000516665 UTYO14607 1347 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 NEDD4P46934 1319 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 IGSF9BQ9UPX0 1349 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 MYH14Q7Z406 1995 aaKnown RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 TRBV5-5A0A0J9YX44 114 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 IQCMA0A1B0GVH7 501 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 IGLON5A6NGN9 336 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 C11orf94C9JXX5 98 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC24A1O60721 1099 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 IGLV6-57P01721 117 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 SKILP12757 684 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZP3P21754 424 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 CHMP24386 653 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 CASP5P51878 434 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 GIT2Q14161 759 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF57Q68EA5 555 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF683Q8IZ20 524 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZCCHC24Q8N2G6 241 aaKnown RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 BBS1Q8NFJ9 593 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC25A38Q96DW6 304 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM20AQ96MK3 541 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 MBOAT4Q96T53 435 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 RAD9AQ99638 391 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 PHF7Q9BWX1 381 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 TEKT3Q9BXF9 490 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 TNMDQ9H2S6 317 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 GLIPR2Q9H4G4 154 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 MROH8Q9H579 483 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 TAF1DQ9H5J8 278 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 TMEM106BQ9NUM4 274 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 GGA3Q9NZ52 723 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 UBA2Q9UBT2 640 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 CNOT7Q9UIV1 285 aaKnown RBP-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 LYVE1Q9Y5Y7 322 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 SCINQ9Y6U3 715 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms