RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RARRES3Q9UL19 164 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 SRPK3Q9UPE1 567 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 LOXL2Q9Y4K0 774 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 PCDHGA8Q9Y5G5 932 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 USH1CQ9Y6N9 552 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 A0A1W2PNU3 283 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 GMNCA6NCL1 334 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 EFCAB7A8K855 629 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 PLD2O14939 933 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 PIP5K1BO14986 540 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 RGS14O43566 566 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 SCELO95171 688 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 VIMP08670 466 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 HBQ1P09105 142 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 PRR35P0CG20 571 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 PCSK2P16519 638 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 HNRNPH1P31943 449 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 RPS13P62277 151 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 GNGT1P63211 74 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 BTKQ06187 659 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TGM3Q08188 693 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TBL3Q12788 808 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 FOXC1Q12948 553 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TARDBPQ13148 414 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 NDUFA9Q16795 377 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 DEFB110Q30KQ9 67 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 FAM214AQ32MH5 1076 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 GALNT18Q6P9A2 607 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 EPGNQ6UW88 154 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 CEACAM20Q6UY09 585 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 Q6ZSR9 355 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 PPP1R3BQ86XI6 285 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 METTL4Q8N3J2 472 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 KDF1Q8NAX2 398 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 AGR3Q8TD06 166 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 FCRL1Q96LA6 429 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 LRFN5Q96NI6 719 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TAAR9Q96RI9 348 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 CENPKQ9BS16 269 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TBCDQ9BTW9 1192 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 TRIM55Q9BYV6 548 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 ASPSCR1Q9BZE9 553 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 ACPTQ9BZG2 426 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 ROGDIQ9GZN7 287 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 REXO4Q9GZR2 422 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 AICDAQ9GZX7 198 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 FGFR1OP2Q9NVK5 253 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 RIC8BQ9NVN3 520 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 AHSPQ9NZD4 102 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 ADAM29Q9UKF5 820 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 ZMIZ1Q9ULJ6 1067 aa11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 RUVBL1Q9Y265 456 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-220ENST00000514830 SEC16AO15027 2179 aa11.4□□□□□ -0.59
PDLIM5-220ENST00000514830 CFAP47Q6ZTR5 3102 aa11.4□□□□□ -0.59
PDLIM5-220ENST00000514830 HYKKA2RU49 373 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 SDHDO14521 159 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 LSM1O15116 133 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 POLR1CO15160 346 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ETHE1O95571 254 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ONECUT2O95948 504 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 JUNP05412 331 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 CCL4P13236 92 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 SKP1P63208 163 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 CYP4F2P78329 520 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 DDX39BQ13838 428 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 COL9A2Q14055 689 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 HERC3Q15034 1050 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 KIAA0040Q15053 153 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 MUM1Q2TAK8 710 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 HKDC1Q2TB90 917 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 SPIN4Q56A73 249 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 OGFOD2Q6N063 350 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 CGB2Q6NT52 195 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 RHBDD2Q6NTF9 364 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ABHD17CQ6PCB6 329 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 LARP4Q71RC2 724 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ABHD13Q7L211 337 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 MAVSQ7Z434 540 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 UBE3DQ7Z6J8 389 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 DDIASQ8IXT1 998 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 KCT2Q8NC54 265 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 OR2T11Q8NH01 316 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ACTRT2Q8TDY3 377 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 UTP15Q8TED0 518 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 CHTF18Q8WVB6 975 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 CCT6BQ92526 530 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 RGMAQ96B86 450 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 MTFMTQ96DP5 389 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 PPP3R2Q96LZ3 170 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 C10orf90Q96M02 699 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 C3orf30Q96M34 536 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 KCNC2Q96PR1 638 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF717Q9BY31 904 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 NRSN2Q9GZP1 204 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 SPRTNQ9H040 489 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms