RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF263O14978 683 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 TLX2O43763 284 aaPredicted RBP4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 SCO2O43819 266 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 LRCH4O75427 683 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 GLCEO94923 617 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 C8orf89P0DMQ9 161 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 OR3A3P47888 321 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 FKBP1BP68106 108 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 AKAP17AQ02040 695 aaKnown RBP4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 ABRQ12979 859 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 FAM106AQ4KMX7 169 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 ARMCX4Q5H9R4 360 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 FGD3Q5JSP0 725 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 ATP1A1-AS1Q5TC04 95 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 CES4AQ5XG92 561 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 IYDQ6PHW0 289 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 CCDC83Q8IWF9 413 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 KLHDC8AQ8IYD2 350 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 CLYBLQ8N0X4 340 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 TEX26Q8N6G2 289 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 TMCO5AQ8N6Q1 288 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 OR5T2Q8NGG2 359 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 C11orf45Q8TAV5 145 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 UBLCP1Q8WVY7 318 aaPredicted RBP4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 CASP10Q92851 521 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 OMA1Q96E52 524 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 POM121L2Q96KW2 1035 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 USP28Q96RU2 1077 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 OVOL2Q9BRP0 275 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 DPEP2Q9H4A9 486 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 TMEM161AQ9NX61 479 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 ERRFI1Q9UJM3 462 aaPredicted RBP4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 SATB2Q9UPW6 733 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 TMED7Q9Y3B3 224 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 ACEP12821 1306 aa4.36□□□□□ -1.71
HMGCS1-207ENST00000514610 SMIM30A4D0T7 59 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF732B4DXR9 585 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 G3V2L1 256 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 SURF4O15260 269 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 ATP9AO75110 1047 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 CEACAM4O75871 244 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 KRT3P12035 628 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 MYOGP15173 224 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 SELEP16581 610 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 PRKACGP22612 351 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 SERPINB6P35237 376 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 TSFMP43897 325 aaKnown RBP4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 SNU13P55769 128 aaKnown RBP4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 IRX1P78414 480 aaPredicted RBP4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 RCN2Q14257 317 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 PPA1Q15181 289 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 LRRC37A5PQ49AS3 106 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 BSPRYQ5W0U4 402 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 GSG1LQ6UXU4 331 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF497Q6ZNH5 498 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 KCTD9Q7L273 389 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 TRMT11Q7Z4G4 463 aaKnown RBP4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 CNRIP1Q96F85 164 aaPredicted RBP4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 NSMCE3Q96MG7 304 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 PANX3Q96QZ0 392 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 C17orf62Q9BQA9 187 aa4.35□□□□□ -1.71
HMGCS1-207ENST00000514610 A0A087X0K7 114 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 MPTX1A8MV57 137 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 ARHGEF9O43307 516 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 EDNRAP25101 427 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 RGS19P49795 217 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 GSCP56915 257 aaPredicted RBP4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 HILS1P60008 231 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 CYCSP99999 105 aaKnown RBP4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 ARHGAP1Q07960 439 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 GRB14Q14449 540 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF789Q5FWF6 425 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 SPANXN4Q5MJ08 99 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 WLSQ5T9L3 541 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 KIF6Q6ZMV9 814 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 FRRS1Q6ZNA5 592 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 C17orf107Q6ZR85 190 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 C15orf52Q6ZUT6 534 aaKnown RBP4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 DND1Q8IYX4 353 aaKnown RBP4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 OR4D10Q8NGI6 311 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 RFT1Q96AA3 541 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 LURAP1Q96LR2 239 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 SYT11Q9BT88 431 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 NACAP1Q9BZK3 213 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 GFRA4Q9GZZ7 299 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 CUEDC2Q9H467 287 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 MED20Q9H944 212 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 IL1RAPL2Q9NP60 686 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 PNPLA3Q9NST1 481 aa4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 CWC25Q9NXE8 425 aaPredicted RBP4.34□□□□□ -1.71
HMGCS1-207ENST00000514610 MYH15Q9Y2K3 1946 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 SRRM4A7MD48 611 aaKnown RBP4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 UROSP10746 265 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 STX1BP61266 288 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 FCN2Q15485 313 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 FAM189A2Q15884 450 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 SMU1Q2TAY7 513 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms