RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TSLPQ969D9 159 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 RHBDF1Q96CC6 855 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 CPNE1Q99829 537 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 AIF1LQ9BQI0 150 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 TMEM79Q9BSE2 394 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 CAB39LQ9H9S4 337 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 COPG2Q9UBF2 871 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 PLEKHB1Q9UF11 243 aaPredicted RBP9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 SLC5A6Q9Y289 635 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 KCNE2Q9Y6J6 123 aa9.85□□□□□ -0.83
HMGXB3-205ENST00000514469 OR5H15A6NDH6 313 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 PHGDHO43175 533 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CHST10O43529 356 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 DNAJB6O75190 326 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 WDR47O94967 919 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 SERPIND1P05546 499 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 SMIM10L1P0DMW3 83 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CD1DP15813 335 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 GNAZP19086 355 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 JAK1P23458 1154 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CASQ1P31415 396 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 GGT5P36269 586 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 GP5P40197 560 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TDGF1P3P51864 188 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 SLC12A2P55011 1212 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 ETF1P62495 437 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 OLR1P78380 273 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CAV1Q03135 178 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 ZNF33BQ06732 778 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 USP10Q14694 798 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TGFBIQ15582 683 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 NSDHLQ15738 373 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 EXT1Q16394 746 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 C18orf21Q32NC0 220 aaPredicted RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 SFT2D3Q587I9 215 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CDKL4Q5MAI5 379 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 ABHD17BQ5VST6 288 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 PAPD4Q6PIY7 484 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 QSOX2Q6ZRP7 698 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.84□□□□□ -0.834e-9■■■■■ 83.5
HMGXB3-205ENST00000514469 TCAIMQ8N3R3 496 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 BCORP1Q8N888 145 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 M1APQ8TC57 530 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 FBXO25Q8TCJ0 367 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CREB3L4Q8TEY5 395 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TBC1D20Q96BZ9 403 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TSPAN17Q96FV3 270 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 SMIM10Q96HG1 83 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TAAR6Q96RI8 345 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 UNKQ9C0B0 810 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 AICDAQ9GZX7 198 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 CLK4Q9HAZ1 481 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 MMP25Q9NPA2 562 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 OLAHQ9NV23 265 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 GPRC5BQ9NZH0 403 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TXNDC16Q9P2K2 825 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 TEKT2Q9UIF3 430 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 UTP11Q9Y3A2 253 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
HMGXB3-205ENST00000514469 IGKV3D-11A0A0A0MRZ8 115 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 URADA6NGE7 173 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 NCF1BA6NI72 391 aaPredicted RBP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 NCF1CA8MVU1 366 aaPredicted RBP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 TAPBPO15533 448 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 PRAMEF2O60811 474 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 F10P00742 488 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 SERPINA6P08185 405 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 CCDC166P0CW27 439 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 C1GALT1C1LP0DN25 315 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 NCF1P14598 390 aaPredicted RBP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 STMN1P16949 149 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 GSTM2P28161 218 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 GDF5P43026 501 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 RAB8AP61006 207 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 ATP6V0D1P61421 351 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 SLBPQ14493 270 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 RBBP5Q15291 538 aaKnown RBP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 OR4D1Q15615 310 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 TOR1AIP1Q5JTV8 583 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 ZDHHC24Q6UX98 284 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 SYT10Q6XYQ8 523 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 SLCO4C1Q6ZQN7 724 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 C3orf62Q6ZUJ4 267 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 BEST3Q8N1M1 668 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 SPATA6LQ8N4H0 392 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 PDPRQ8NCN5 879 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 TTLQ8NG68 377 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 GAL3ST3Q96A11 431 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 SEC16BQ96JE7 1060 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 UBXN10Q96LJ8 280 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 MAGEB10Q96LZ2 347 aaPredicted RBP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 C5orf34Q96MH7 638 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 LPAR4Q99677 370 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 NPAS2Q99743 824 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 RAB17Q9H0T7 212 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 KLHL31Q9H511 634 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 WWOXQ9NZC7 414 aa9.83□□□□□ -0.84
HMGXB3-205ENST00000514469 DOCK10Q96BY6 2186 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 DOPEY2Q9Y3R5 2298 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms