RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MLYCDO95822 493 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 EBLN1P0CF75 366 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 NR2F6P10588 404 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 KRT5P13647 590 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 RHCEP18577 417 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 IDSP22304 550 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 DNASE1P24855 282 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 OTX2P32243 289 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 HTR7P34969 479 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 KRT9P35527 623 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 HSPA9P38646 679 aaKnown RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 AIF1P55008 147 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 KCNK10P57789 538 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 NANOS2P60321 138 aaKnown RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 LRRC63Q05C16 580 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 IL10RBQ08334 325 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 MFAP5Q13361 173 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 BMPR2Q13873 1038 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 COBLL1Q53SF7 1204 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 KHDC1LQ5JSQ8 128 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 FAAH2Q6GMR7 532 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 LCN10Q6JVE6 187 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 DOK6Q6PKX4 331 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 CLEC9AQ6UXN8 241 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 TRIM72Q6ZMU5 477 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 LEKR1Q6ZMV7 388 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 Q6ZPB1 254 aaPredicted RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 C9orf47Q6ZRZ4 202 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 MARK2Q7KZI7 788 aaKnown RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 STRADAQ7RTN6 431 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 HSD11B1LQ7Z5J1 315 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM131BQ86XD5 332 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 SYTL1Q8IYJ3 562 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 RTL3Q8N8U3 475 aaKnown RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 DNAAF3Q8N9W5 541 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM35BQ8NCS4 154 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 OR1N1Q8NGS0 311 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 PPP1R35Q8TAP8 253 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 CA5BP1Q8WTZ4 195 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 CENPIQ92674 756 aaPredicted RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 RSC1A1Q92681 617 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF599Q96NL3 588 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 TAAR6Q96RI8 345 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 SECISBP2Q96T21 854 aaKnown RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 MAP3K3Q99759 626 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 TSG101Q99816 390 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 VKORC1Q9BQB6 163 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF559Q9BR84 538 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 MLPHQ9BV36 600 aaPredicted RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 AP1M1Q9BXS5 423 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 XPO4Q9C0E2 1151 aaKnown RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 PDFQ9HBH1 243 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 GPR35Q9HC97 309 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 UBE2TQ9NPD8 197 aaPredicted RBP3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 GPATCH2LQ9NWQ4 482 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 COQ3Q9NZJ6 369 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 PCDHA7Q9UN72 937 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 MEMO1Q9Y316 297 aa3.5□□□□□ -1.85
PDLIM5-218ENST00000513341 SPTBP11277 2137 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 DYTNA2CJ06 578 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 OR5K3A6NET4 321 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ARHGAP42A6NI28 874 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 IDSB3KWA1 339 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 EIF3CLB5ME19 914 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM72CH0Y354 149 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 J3KR12 359 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 KMOO15229 486 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PRAMEF2O60811 474 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MTA2O94776 668 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ZWINTO95229 277 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 RASAL1O95294 804 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CALCAP01258 141 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ATP1A1P05023 1023 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 HOXD4P09016 255 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 SBK3P0C264 359 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PIM1P11309 404 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 UNGP13051 313 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ACP5P13686 325 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ZFXP17010 805 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 VCLP18206 1134 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ITGAXP20702 1163 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 UGT1A4P22310 534 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 LHCGRP22888 699 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CMA1P23946 247 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MMP11P24347 488 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PCSK6P29122 969 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CDH5P33151 784 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PEX19P40855 299 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 HALP42357 657 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PTPN9P43378 593 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 TNFSF10P50591 281 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 POU6F2P78424 691 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 DCDP81605 110 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CUL4AQ13619 759 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 GPR18Q14330 331 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 SEMA3AQ14563 771 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 KCNAB1Q14722 419 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CNN3Q15417 329 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PTPN20Q4JDL3 420 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF628Q5EBL2 1059 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms