RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TNFRSF4P43489 277 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 YBEYP58557 167 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 GTF2H2Q13888 395 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 ZNF718Q3SXZ3 478 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 FAM205BPQ63HN1 556 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 KBTBD2Q8IY47 623 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 LRRC52Q8N7C0 313 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 MINDY2Q8NBR6 621 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PXYLP1Q8TE99 480 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 GLYATL2Q8WU03 294 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 HSPA12BQ96MM6 686 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 CTPS2Q9NRF8 586 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 STOX2Q9P2F5 926 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 H7C417 338 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 GRID2O43424 1007 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 AGFG2O95081 481 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 HTR1AP08908 422 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 MAN2A2P49641 1150 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 OGDHQ02218 1023 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 SLBPQ14493 270 aaKnown RBP eCLIP8.65□□□□□ -1.02
VCAN-208ENST00000512590 TMEM44Q2T9K0 475 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 TMPRSS6Q8IU80 811 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 CAMK1GQ96NX5 476 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PRRX2Q99811 253 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 EGLN1Q9GZT9 426 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 TNFRSF19Q9NS68 423 aa8.65□□□□□ -1.02
VCAN-208ENST00000512590 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 FARSAQ9Y285 508 aaKnown RBP8.65□□□□□ -1.02
VCAN-208ENST00000512590 NSG1A0A0A6YYJ2 146 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 UPK3BL1B0FP48 263 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 UPK3BL2E5RIL1 263 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 MKRN2OSH3BPM6 223 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 POP7O75817 140 aaKnown RBP8.65□□□□□ -1.03
VCAN-208ENST00000512590 PRKCGP05129 697 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 HNRNPA1P09651 372 aaKnown RBP eCLIP8.65□□□□□ -1.03
VCAN-208ENST00000512590 MSS51Q4VC12 460 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 TMEM69Q5SWH9 247 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 RAB12Q6IQ22 244 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 ZFPM1Q8IX07 1006 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 SYNPOQ8N3V7 929 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 SPATA6LQ8N4H0 392 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 IQCF1Q8N6M8 205 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 OR5T1Q8NG75 326 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 TSACCQ96A04 125 aaPredicted RBP8.65□□□□□ -1.03
VCAN-208ENST00000512590 ZCCHC3Q9NUD5 404 aaKnown RBP8.65□□□□□ -1.03
VCAN-208ENST00000512590 DKK3Q9UBP4 350 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 MYRFQ9Y2G1 1151 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 ATP23Q9Y6H3 246 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 ZNF541Q9H0D2 1346 aa8.65□□□□□ -1.03
VCAN-208ENST00000512590 TGM1P22735 817 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 MPSTP25325 297 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 RBMXP38159 391 aaKnown RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 RAB8AP61006 207 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 DBPQ10586 325 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 UBE2UQ5VVX9 321 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 DAGLBQ8NCG7 672 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 IRGQQ8WZA9 623 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 DNAJA3Q96EY1 480 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 TMEM59Q9BXS4 323 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 THSD1Q9NS62 852 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CUTCQ9NTM9 273 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 P2RX2Q9UBL9 471 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 UBE2J1Q9Y385 318 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 ACTL7AQ9Y615 435 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 H3BQF6 201 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SRPRAP08240 638 aaKnown RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 G6PDP11413 515 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 GZMAP12544 262 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 VAMP1P23763 118 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SIRPAP78324 504 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 PARP8Q8N3A8 854 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 EDAQ92838 391 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 UHRF1Q96T88 793 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 ITM2CQ9NQX7 267 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SLC39A9Q9NUM3 307 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 TAS2R9Q9NYW1 312 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CLEC1BQ9P126 229 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 TCFL5Q9UL49 500 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 PLAGL1Q9UM63 463 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 RNF215Q9Y6U7 377 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 SLC35F4A4IF30 521 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 ERBB2P04626 1255 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 GLRA2P23416 452 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 DPP4P27487 766 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 NTSR1P30989 418 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 RARRES1P49788 294 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 POU6F2P78424 691 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 CTBP1Q13363 440 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 GRM7Q14831 915 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 NPNTQ6UXI9 565 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 Q6ZVU0 165 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SLC25A44Q96H78 314 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 PCDHB18PQ96TA0 734 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SERTAD4Q9NUC0 356 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms