RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PYCR3Q53H96 274 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 LIPJQ5W064 366 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 TRIM46Q7Z4K8 759 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 ARHGAP22Q7Z5H3 698 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 SYVN1Q86TM6 617 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 SPNS2Q8IVW8 549 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 DCUN1D3Q8IWE4 304 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 NCSTNQ92542 709 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 RAD51AP1Q96B01 352 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 SLC7A6OSQ96CW6 309 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 EGFL8Q99944 293 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 SGPP1Q9BX95 441 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 GSDMCQ9BYG8 508 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 TUBB1Q9H4B7 451 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 SEMA4BQ9NPR2 832 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 DNAJC11Q9NVH1 559 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 RIC8BQ9NVN3 520 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 ASIC5Q9NY37 505 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 UTP6Q9NYH9 597 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 TAGLN3Q9UI15 199 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 TMEM98Q9Y2Y6 226 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 ZNF451Q9Y4E5 1061 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 RP1L1Q8IWN7 2480 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 LRRC14BA6NHZ5 514 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 NCF1BA6NI72 391 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 NCF1CA8MVU1 366 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PPP6CO00743 305 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 LRRTM2O43300 516 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 ZG16O60844 167 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 WFS1O76024 890 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 FUCA1P04066 466 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 JUNP05412 331 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 NCF1P14598 390 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 IMPA1P29218 277 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 EPHA3P29320 983 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PDHA2P29803 388 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 GNPDA1P46926 289 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 HSPA7P48741 367 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 CCNG1P51959 295 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 RPS18P62269 152 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 ILF3Q12906 894 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 DNASE1L3Q13609 305 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 SQLEQ14534 574 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 NAA25Q14CX7 972 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 ZRSR2Q15696 482 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PDCD2Q16342 344 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 CYP2A13Q16696 494 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 GSTA3Q16772 222 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PTCHD3Q3KNS1 767 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 COQ5Q5HYK3 327 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 VWA5B1Q5TIE3 1220 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 LETMD1Q6P1Q0 360 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 GDF7Q7Z4P5 450 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 SPATA19Q7Z5L4 167 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 TREML1Q86YW5 311 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 LRRC56Q8IYG6 542 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 CFAP206Q8IYR0 622 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 TBC1D21Q8IYX1 336 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 ADGRG4Q8IZF6 3080 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 TEX9Q8N6V9 391 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 RBMXL3Q8N7X1 1067 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 OR52B6Q8NGF0 335 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 OR9A1PQ8NGU1 263 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 OR10G6Q8NH81 332 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 OR5K2Q8NHB8 316 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 RP9Q8TA86 221 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 SLC38A3Q99624 504 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 RAB11FIP5Q9BXF6 653 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 BRINP2Q9C0B6 783 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PITHD1Q9GZP4 211 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PCBD2Q9H0N5 130 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 ING2Q9H160 280 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 NOL11Q9H8H0 719 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 TRNAU1APQ9NX07 287 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 STOX2Q9P2F5 926 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PRKAB1Q9Y478 270 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PLEKHM1Q9Y4G2 1056 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 CCL27Q9Y4X3 112 aa10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PCDHGA9Q9Y5G4 932 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-217ENST00000512274 PDZD2O15018 2839 aa10.02□□□□□ -0.8
PDLIM5-217ENST00000512274 KCNE1BA0A087WTH5 132 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 DYTNA2CJ06 578 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 A6NL46 340 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 H0YIV9 168 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 IFRD1O00458 451 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PIP5K1BO14986 540 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 UBDO15205 165 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 CLDN9O95484 217 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 GUCA1CO95843 209 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 KRT6AP02538 564 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 KRT6BP04259 564 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 HSD3B1P14060 373 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 HOXB4P17483 251 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 LBPP18428 481 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 HSD3B2P26439 372 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms