RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ZNF789Q5FWF6 425 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 LCN1P1Q5VSP4 162 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ALKBH5Q6P6C2 394 aaKnown RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 SLC25A47Q6Q0C1 308 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 LEKR1Q6ZMV7 388 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 PHLDB2Q86SQ0 1253 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ASPGQ86U10 573 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 CCDC60Q8IWA6 550 aaPredicted RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 KLHDC8AQ8IYD2 350 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ZNF440Q8IYI8 595 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ZNF614Q8N883 585 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 NIPA2Q8N8Q9 360 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 GBP7Q8N8V2 638 aaPredicted RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 GPATCH11Q8N954 259 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 LPCAT1Q8NF37 534 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 OR4C15Q8NGM1 316 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 SLC26A7Q8TE54 656 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 CKAP2Q8WWK9 683 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 METTL21AQ8WXB1 218 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 DYRK2Q92630 601 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RFT1Q96AA3 541 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 NECTIN4Q96NY8 510 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 BTBD9Q96Q07 612 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 CDCA3Q99618 268 aaPredicted RBP2.76□□□□□ -1.97
CHD1-207ENST00000511628 VGLL1Q99990 258 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 PYGO2Q9BRQ0 406 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 PANK2Q9BZ23 570 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 UBQLN3Q9H347 655 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 C10orf88Q9H8K7 445 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RNF121Q9H920 327 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 DBNDD1Q9H9R9 158 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 RNPEPL1Q9HAU8 725 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 MAN2C1Q9NTJ4 1040 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 EPHA6Q9UF33 1036 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 GRID1Q9ULK0 1009 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 STX8Q9UNK0 236 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 AGTPBP1Q9UPW5 1226 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 ANGPTL3Q9Y5C1 460 aa2.76□□□□□ -1.97
CHD1-207ENST00000511628 DISP3Q9P2K9 1392 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 PFASO15067 1338 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 IL16Q14005 1332 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 ABCC9O60706 1549 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 A0A087WUV0 522 aaPredicted RBP2.75□□□□□ -1.97
CHD1-207ENST00000511628 A0A087X0K7 114 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 C13orf42A0A1B0GVH6 325 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 ZNF195O14628 629 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 PGRMC2O15173 223 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TEX28O15482 410 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 DCXO43602 365 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 KERAO60938 352 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 KHDRBS3O75525 346 aaKnown RBP2.75□□□□□ -1.97
CHD1-207ENST00000511628 AP2A2O94973 939 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 MT-ND3P03897 115 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 RAF1P04049 648 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 RBMS1P29558 406 aaKnown RBP2.75□□□□□ -1.97
CHD1-207ENST00000511628 CETN2P41208 172 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 LEPRP48357 1165 aaKnown RBP2.75□□□□□ -1.97
CHD1-207ENST00000511628 UCP2P55851 309 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 CLDN17P56750 224 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 HERV-K104P61576 105 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 BTG1P62324 171 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TRA2AQ13595 282 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHD1-207ENST00000511628 TRIM29Q14134 588 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TMEM132DQ14C87 1099 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TEAD2Q15562 447 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 ADAMTSL4-AS1Q5T5F5 129 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 BSPRYQ5W0U4 402 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 DHRS11Q6UWP2 260 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 Q6ZSR9 355 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 RAPH1Q70E73 1250 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 SLC24A5Q71RS6 500 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 COX8CQ7Z4L0 72 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 P2RY8Q86VZ1 359 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 LACC1Q8IV20 430 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 SERPINA12Q8IW75 414 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 MARVELD2Q8N4S9 558 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 CLEC1AQ8NC01 280 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 MAPK1IP1LQ8NDC0 245 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 UBLCP1Q8WVY7 318 aaPredicted RBP2.75□□□□□ -1.97
CHD1-207ENST00000511628 ARHGAP45Q92619 1136 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 AZIN2Q96A70 460 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 NXPE2Q96DL1 559 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 CDKN2AIPNLQ96HQ2 116 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 ATP6V0BQ99437 205 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 SYT11Q9BT88 431 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 DCTN5Q9BTE1 182 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 CABLES2Q9BTV7 478 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 PITPNM3Q9BZ71 974 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 MTMR12Q9C0I1 747 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 CUEDC2Q9H467 287 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 GPR173Q9NS66 373 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 RNF186Q9NXI6 227 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 SPG21Q9NZD8 308 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 PAK5Q9P286 719 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 TMEM181Q9P2C4 612 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 C19orf25Q9UFG5 118 aaPredicted RBP2.75□□□□□ -1.97
CHD1-207ENST00000511628 PILRBQ9UKJ0 227 aa2.75□□□□□ -1.97
CHD1-207ENST00000511628 MAN1B1Q9UKM7 699 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms