RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 TMEM189-UBE2V1I3L0A0 370 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 M0R3G1 203 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SNAP23O00161 211 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 FXYD1O00168 92 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SDHDO14521 159 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 OR2B3O76000 313 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SRP72O76094 671 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 RECQL4O94761 1208 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 RGS11O94810 467 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 CCNB2O95067 398 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 DHFRP00374 187 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 LDLRP01130 860 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 IL1AP01583 271 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 PIGRP01833 764 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 CALB1P05937 261 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 CDK1P06493 297 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SNRPB2P08579 225 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 GNAO1P09471 354 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 RAP2AP10114 183 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 HAPLN1P10915 354 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 RNH1P13489 461 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 ATP6V1B2P21281 511 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 GPX3P22352 226 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 FPR2P25090 351 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ACRV1P26436 265 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SDHAP31040 664 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 MAPK4P31152 587 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SHMT2P34897 504 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 NUDT2P50583 147 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 HAND2P61296 217 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 YWHAEP62258 255 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 NOMO3P69849 1222 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ZNF33AQ06730 810 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SRSF4Q08170 494 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 ECH1Q13011 328 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 TRAF3Q13114 568 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 NME3Q13232 169 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 PDE1CQ14123 709 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 DPYSL3Q14195 570 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 CLCA4Q14CN2 919 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 NCF4Q15080 339 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ZYXQ15942 572 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 KIZQ2M2Z5 673 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 PGS1Q32NB8 556 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 HSDL1Q3SXM5 330 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 IQCCQ4KMZ1 466 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 PXDC1Q5TGL8 231 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SEL1L3Q68CR1 1132 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 C5orf46Q6UWT4 87 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 MSANTD1Q6ZTZ1 278 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 FAM183BPQ6ZVS7 135 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 C1orf186Q6ZWK4 172 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 BRINP3Q76B58 766 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 OTOP1Q7RTM1 612 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 KCNK18Q7Z418 384 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 R3HCC1LQ7Z5L2 792 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 P3H2Q8IVL5 708 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 DDIASQ8IXT1 998 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ZNF565Q8N9K5 539 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 OR8J3Q8NGG0 315 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 OR2T11Q8NH01 316 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 OR4K15Q8NH41 348 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 OR5K1Q8NHB7 308 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 MCFD2Q8NI22 146 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 NTN5Q8WTR8 489 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 ZNF296Q8WUU4 475 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 C1orf54Q8WWF1 131 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ASB15Q8WXK1 588 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 NR4A3Q92570 626 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 STAMQ92783 540 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 SLC5A5Q92911 643 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ECHDC3Q96DC8 303 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 NEIL1Q96FI4 390 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 MSANTD3Q96H12 275 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 C3orf30Q96M34 536 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 HS6ST2Q96MM7 605 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 CMTM3Q96MX0 182 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 FOPNLQ96NB1 174 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 FAM193BQ96PV7 902 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 OR2M2Q96R28 347 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 TMEM209Q96SK2 561 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 MTERF1Q99551 399 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 SLC30A2Q9BRI3 323 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 MTG1Q9BT17 334 aaPredicted RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 ZSCAN5AQ9BUG6 496 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 JAM3Q9BX67 310 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 TUBA4BQ9H853 241 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 CERS4Q9HA82 394 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 TCF7L1Q9HCS4 588 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 WDR6Q9NNW5 1121 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 AGPAT3Q9NRZ7 376 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 GIMAP4Q9NUV9 329 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 COPZ2Q9P299 210 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 RBPJLQ9UBG7 517 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 XPR1Q9UBH6 696 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 METTL1Q9UBP6 276 aaKnown RBP2.18□□□□□ -2.06
CAST-226ENST00000509529 UBQLN2Q9UHD9 624 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 MOSPD1Q9UJG1 213 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 ZNF112Q9UJU3 913 aa2.18□□□□□ -2.06
CAST-226ENST00000509529 FBXL3Q9UKT7 428 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms