RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FCRLBQ6BAA4 426 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 CPEB2Q7Z5Q1 589 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 ANKRD37Q7Z713 158 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 CMC1Q7Z7K0 106 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 GPSM1Q86YR5 675 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 OR1N1Q8NGS0 311 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 NT5CQ8TCD5 201 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 CCT6BQ92526 530 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 ANKRD7Q92527 254 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 TSLPQ969D9 159 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 RHBDF1Q96CC6 855 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 TMEM79Q9BSE2 394 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 LRRC1Q9BTT6 524 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 TUBB6Q9BUF5 446 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 FAM129AQ9BZQ8 928 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 DERL2Q9GZP9 239 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 RHBGQ9H310 441 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 KLHL31Q9H511 634 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 LRRC4CQ9HCJ2 640 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 CD274Q9NZQ7 290 aa13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 C19orf25Q9UFG5 118 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-228ENST00000508974 A0A0G2JN53 185 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 A0A1W2PQ72 361 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 DYTNA2CJ06 578 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 A8MUI8 341 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 C4orf51C9J302 202 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 TAPBPO15533 448 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 CHST10O43529 356 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 B4GALT2O60909 372 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 WISP3O95389 354 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 GSTA2P09210 222 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 CD1DP15813 335 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SPRP35270 261 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SOX11P35716 441 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SLC6A12P48065 614 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 HSPA7P48741 367 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 RAB10P61026 200 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 ZNF33BQ06732 778 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SLBPQ14493 270 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 ABRAXAS2Q15018 415 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 TLR1Q15399 786 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 RAPH1Q70E73 1250 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 ABHD13Q7L211 337 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 ZNF572Q7Z3I7 529 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SNX31Q8N9S9 440 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 UTP15Q8TED0 518 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 SARGQ9BW04 601 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 RNF112Q9ULX5 631 aa13.96□□□□□ -0.17
UBE2D3-228ENST00000508974 CNTRLQ7Z7A1 2325 aa13.96□□□□□ -0.18
UBE2D3-228ENST00000508974 PCDH17O14917 1159 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 CLGNO14967 610 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 FHP07954 510 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 C1GALT1C1LP0DN25 315 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 GNAZP19086 355 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 STX2P32856 288 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 AHRP35869 848 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 RHAGQ02094 409 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 GUCY2DQ02846 1103 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 SRSF11Q05519 484 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 HYAL2Q12891 473 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 BMPR2Q13873 1038 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 ELOAQ14241 798 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 NSDHLQ15738 373 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 UAP1Q16222 522 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 SFT2D3Q587I9 215 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 GRTP1Q5TC63 336 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 RIPOR1Q6ZS17 1223 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 AFAP1L2Q8N4X5 818 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 TRPV3Q8NET8 790 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 GRHL3Q8TE85 626 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 IMMP1LQ96LU5 166 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 LMF1Q96S06 567 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 SLC6A16Q9GZN6 736 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.95□□□□□ -0.183e-13■□□□□ 9.9
UBE2D3-228ENST00000508974 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 AGPAT4Q9NRZ5 378 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 LANCL2Q9NS86 450 aa13.95□□□□□ -0.18
UBE2D3-228ENST00000508974 ANKUB1A6NFN9 424 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 CCNT2O60583 730 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 H2AFYO75367 372 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 CBX6O95503 412 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 WDPCPO95876 746 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 S100BP04271 92 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 RNF224P0DH78 156 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 TSFMP43897 325 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 AGTR2P50052 363 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 ATP6V0D1P61421 351 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 SKP1P63208 163 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 ACTN3Q08043 901 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 DLG1Q12959 904 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 ZKSCAN8Q15776 578 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 ABHD17BQ5VST6 288 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 ADNP2Q6IQ32 1131 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 PAPD4Q6PIY7 484 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 SLCO4C1Q6ZQN7 724 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 CYP4X1Q8N118 509 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 CREB3L4Q8TEY5 395 aa13.94□□□□□ -0.18
UBE2D3-228ENST00000508974 TBC1D20Q96BZ9 403 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms