RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CMKLR1Q99788 373 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 TIMM29Q9BSF4 260 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 CCM2Q9BSQ5 444 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 FRMD8P1Q9BZ68 369 aaPredicted RBP4.4□□□□□ -1.71
NUP54-206ENST00000508465 ASPSCR1Q9BZE9 553 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 XKR8Q9H6D3 395 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 APMAPQ9HDC9 416 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 SLC40A1Q9NP59 571 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 SARS2Q9NP81 518 aaKnown RBP4.4□□□□□ -1.71
NUP54-206ENST00000508465 THSD1Q9NS62 852 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 IMP3Q9NV31 184 aaKnown RBP4.4□□□□□ -1.71
NUP54-206ENST00000508465 PAK5Q9P286 719 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 MARCH4Q9P2E8 410 aaPredicted RBP4.4□□□□□ -1.71
NUP54-206ENST00000508465 FEZ2Q9UHY8 353 aaPredicted RBP4.4□□□□□ -1.71
NUP54-206ENST00000508465 SCOCQ9UIL1 159 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 ADAM21Q9UKJ8 722 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 JRKLQ9Y4A0 524 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 PCDHGA8Q9Y5G5 932 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 PKD1L2Q7Z442 2459 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 ACACAQ13085 2346 aa4.4□□□□□ -1.71
NUP54-206ENST00000508465 IGSF10Q6WRI0 2623 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 IGHV5-51A0A0C4DH38 117 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 OR5K4A6NMS3 321 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 GOLGA8KD6RF30 607 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 GOLGA8TH3BQL2 631 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 NVLO15381 856 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 CD3EAPO15446 510 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZW10O43264 779 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZSCAN12O43309 604 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 DUX1O43812 170 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 KIF5CO60282 957 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 RASSF9O75901 435 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 GAS8O95995 478 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 GOT2P00505 430 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 KRT14P02533 472 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 PRB1P04280 392 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CD1AP06126 327 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ITGA2BP08514 1039 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 SLC35G4P0C7Q5 338 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 RALBP11234 206 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 MTHFD1P11586 935 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 SLC2A4P14672 509 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 POLR2CP19387 275 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 ITGALP20701 1170 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ADRA1DP25100 572 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 MSNP26038 577 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 CERS1P27544 350 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 COILP38432 576 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 HADHAP40939 763 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 HALP42357 657 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 NPY2RP49146 381 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 GNG11P61952 73 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CYP4F2P78329 520 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 PDE1BQ01064 536 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 MC2RQ01718 297 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CACNG1Q06432 222 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 FOXM1Q08050 763 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZNF844Q08AG5 666 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CDH17Q12864 832 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ABRQ12979 859 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 KLF9Q13886 244 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 KCNAB1Q14722 419 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 GPR33Q49SQ1 333 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 BCL7AQ4VC05 210 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CACHD1Q5VU97 1274 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CAPRIN2Q6IMN6 1127 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 IRGCQ6NXR0 463 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 WDR74Q6RFH5 385 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 WASH2PQ6VEQ5 465 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CERS6Q6ZMG9 384 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZNF517Q6ZMY9 492 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZNF534Q76KX8 674 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ARHGAP22Q7Z5H3 698 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 LINC00523Q86TU6 105 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CAND1Q86VP6 1230 aaKnown RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 MPP5Q8N3R9 675 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 C2orf73Q8N5S3 287 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZNF248Q8NDW4 579 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 OR13J1Q8NGT2 312 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 OR2L2Q8NH16 312 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 OR4L1Q8NH43 312 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CFAP61Q8NHU2 1237 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 DTX3LQ8TDB6 740 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 MAIP1Q8WWC4 291 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 RSC1A1Q92681 617 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 HOXB13Q92826 284 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 ULK4Q96C45 1275 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 ZNF514Q96K75 400 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 PBKQ96KB5 322 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 CAPZA3Q96KX2 299 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 C9orf72Q96LT7 481 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 RMDN2Q96LZ7 410 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 C12orf66Q96MD2 445 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 PPM1MQ96MI6 270 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 TAAR9Q96RI9 348 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 OSBPL9Q96SU4 736 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 WACQ9BTA9 647 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.39□□□□□ -1.71
NUP54-206ENST00000508465 DPH1Q9BZG8 443 aa4.39□□□□□ -1.71
NUP54-206ENST00000508465 PRORYQ9H606 182 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms