RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 OR4D9Q8NGE8 314 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 ZCCHC10Q8TBK6 192 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 MS4A6EQ96DS6 147 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 METTL2AQ96IZ6 378 aaKnown RBP16.65■□□□□ 0.26
RNF4-209ENST00000507784 CCDC74BQ96LY2 380 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 ZNF385DQ9H6B1 395 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 BAIAP2L1Q9UHR4 511 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 DLGAP4Q9Y2H0 992 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 GPR45Q9Y5Y3 372 aa16.65■□□□□ 0.26
RNF4-209ENST00000507784 GNG14A0A1W2PPG7 69 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 URADA6NGE7 173 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 ERICH4A6NGS2 130 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 PSMD12O00232 456 aaPredicted RBP16.64■□□□□ 0.25
RNF4-209ENST00000507784 PLPP1O14494 284 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 SEMA3DO95025 777 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 GBAP04062 536 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 ANXA4P09525 319 aaPredicted RBP16.64■□□□□ 0.25
RNF4-209ENST00000507784 TIA1P31483 386 aaKnown RBP eCLIP16.64■□□□□ 0.25
RNF4-209ENST00000507784 ACADVLP49748 655 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 RAE1P78406 368 aaKnown RBP16.64■□□□□ 0.25
RNF4-209ENST00000507784 CLPPQ16740 277 aaPredicted RBP16.64■□□□□ 0.25
RNF4-209ENST00000507784 HKDC1Q2TB90 917 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 PDCD4Q53EL6 469 aaKnown RBP16.64■□□□□ 0.25
RNF4-209ENST00000507784 CCNYL2Q5T2Q4 361 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 OR4C11Q6IEV9 310 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 TRIM40Q6P9F5 258 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 PAGE2Q7Z2X7 111 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 KMT5CQ86Y97 462 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
RNF4-209ENST00000507784 CLHC1Q8NHS4 586 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 KLHL6Q8WZ60 621 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 QRFPRQ96P65 431 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 TSSK3Q96PN8 268 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 PHOX2BQ99453 314 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 C17orf62Q9BQA9 187 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 SLC6A16Q9GZN6 736 aa16.64■□□□□ 0.25
RNF4-209ENST00000507784 IGHV5-10-1A0A0J9YXX1 117 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 PROB1E7EW31 1015 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 TOX3O15405 576 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 SRPX2O60687 465 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 CBFA2T3O75081 653 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 UBOX5O94941 541 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 CTSBP07858 339 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ZNF888P0CJ79 500 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 SDC1P18827 310 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 GPX3P22352 226 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 SSR2P43308 183 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 UFM1P61960 85 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 BTN3A2P78410 334 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 COL9A2Q14055 689 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 GPR19Q15760 415 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ZSCAN26Q16670 478 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 RIPOR1Q6ZS17 1223 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 CCDC121Q6ZUS5 278 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ZNF771Q7L3S4 317 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 UBE3DQ7Z6J8 389 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 NUDT13Q86X67 352 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 TREML1Q86YW5 311 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 RCBTB1Q8NDN9 531 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 OR2L5Q8NG80 312 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 GAL3ST3Q96A11 431 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 SLC45A3Q96JT2 553 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 SLC41A2Q96JW4 573 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ZBTB18Q99592 522 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 DPY30Q9C005 99 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 AICDAQ9GZX7 198 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ZNF768Q9H5H4 540 aaKnown RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 COPS7BQ9H9Q2 264 aaPredicted RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ARL8BQ9NVJ2 186 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ASIC5Q9NY37 505 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 CCDC167Q9P0B6 97 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 SEMA5BQ9P283 1151 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 MCM8Q9UJA3 840 aa16.63■□□□□ 0.25
RNF4-209ENST00000507784 ASCC3Q8N3C0 2202 aaKnown RBP16.63■□□□□ 0.25
RNF4-209ENST00000507784 SCN3AQ9NY46 2000 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 GPR179Q6PRD1 2367 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 LOC100653049A0A140TA62 436 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 TMEM150CB9EJG8 249 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 NTN3O00634 580 aaPredicted RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 TXNDC9O14530 226 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 ZSCAN9O15535 394 aaPredicted RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 AKAP10O43572 662 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 SLC22A3O75751 556 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 KRT34O76011 436 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 LRATO95237 230 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 B3GALT4O96024 378 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 THRAP10827 490 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 FOLR1P15328 257 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 NELFEP18615 380 aaKnown RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 ADSLP30566 484 aaPredicted RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 BSGP35613 385 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 GABRA4P48169 554 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 IRX1P78414 480 aaPredicted RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 ADPRMQ3LIE5 342 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 MANEAQ5SRI9 462 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 ABHD17CQ6PCB6 329 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 GK5Q6ZS86 529 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms