RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 BCL6P41182 706 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 GDF5P43026 501 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 SERPINB4P48594 390 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 AGTR2P50052 363 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 TMPRSS3P57727 454 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 OCA2Q04671 838 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 SSPNQ14714 243 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 PCLAFQ15004 111 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 NCF4Q15080 339 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 GPR19Q15760 415 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 TUBB8Q3ZCM7 444 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 NKAIN1Q4KMZ8 207 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 UNC50Q53HI1 259 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 SPIN4Q56A73 249 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 DEPDC1Q5TB30 811 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 MRPL14Q6P1L8 145 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 OVCH1Q7RTY7 1134 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 HPS6Q86YV9 775 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 NUDCD3Q8IVD9 361 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 SAMD14Q8IZD0 417 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 C4orf33Q8N1A6 199 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 IL22RA1Q8N6P7 574 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 LSM14AQ8ND56 463 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 WDR20Q8TBZ3 569 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF473Q8WTR7 871 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 RGMAQ96B86 450 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 WBP1Q96G27 269 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF764Q96H86 408 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 FAM111AQ96PZ2 611 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 TMEM237Q96Q45 408 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 SERINC2Q96SA4 455 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 MS4A8Q9BY19 250 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 REXO4Q9GZR2 422 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ELOVL6Q9H5J4 265 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 NOL11Q9H8H0 719 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF304Q9HCX3 659 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 SEMA3GQ9NS98 782 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 IRAK4Q9NWZ3 460 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF282Q9UDV7 671 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 NDOR1Q9UHB4 597 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 GPN3Q9UHW5 284 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 RUVBL1Q9Y265 456 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 TMED5Q9Y3A6 229 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 MMACHCQ9Y4U1 282 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 CACNA1GO43497 2377 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 TMEM120BA0PK00 339 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 VSTM2BA6NLU5 285 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 OR7A17O14581 309 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 NDUFS4O43181 175 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 GALR3O60755 368 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 VPS4BO75351 444 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ITGB2P05107 769 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 UQCRHP07919 91 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 IFI6P09912 130 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 SFTPCP11686 197 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 PTPN4P29074 926 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 HMOX2P30519 316 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ALDH3A1P30838 453 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 TLX1P31314 330 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 PGGT1BP53609 377 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 NAGLUP54802 743 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 MTTPP55157 894 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 MAGOHP61326 146 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 CLN3Q13286 438 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 KCNAB1Q14722 419 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 RBBP5Q15291 538 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 TERF2Q15554 542 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 CATSPEREQ5SY80 951 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 HHATQ5VTY9 493 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 KHDRBS2Q5VWX1 349 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 GALNT18Q6P9A2 607 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 RGS9BPQ6ZS82 235 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 RAB43Q86YS6 212 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 CLYBLQ8N0X4 340 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 C2orf73Q8N5S3 287 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 NATD1Q8N6N6 113 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ANKRD53Q8N9V6 530 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ARMC2Q8NEN0 867 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 OR2Y1Q8NGV0 311 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 AGAP11Q8TF27 550 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 EXT2Q93063 718 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 MS4A6EQ96DS6 147 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 C10orf90Q96M02 699 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 PPM1MQ96MI6 270 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 SIKE1Q9BRV8 207 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 PELOQ9BRX2 385 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ILKAPQ9H0C8 392 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 GSTO2Q9H4Y5 243 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 DDX31Q9H8H2 851 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 GPN2Q9H9Y4 310 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ZBTB26Q9HCK0 441 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 APMAPQ9HDC9 416 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 DMRT3Q9NQL9 472 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms