RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SPOUT1Q5T280 376 aaKnown RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD20A1Q5TYW2 823 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 LCN1P1Q5VSP4 162 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD20A3Q5VUR7 823 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 FAM166AQ6J272 317 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 CASC4Q6P4E1 433 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 BTNL8Q6UX41 500 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 GBP6Q6ZN66 633 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 NBPF5PQ86XG9 351 aaPredicted RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 CROCCP3Q8IVE0 287 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 P2RX5Q93086 422 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 AK8Q96MA6 479 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 NYXQ9GZU5 481 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 RIMS4Q9H426 269 aaPredicted RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 ACTL8Q9H568 366 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 PPANQ9NQ55 473 aaKnown RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 PHPT1Q9NRX4 125 aaPredicted RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 POLKQ9UBT6 870 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 VIRMAQ69YN4 1812 aaKnown RBP5.31□□□□□ -1.56
HERC4-213ENST00000506515 NCAPD2Q15021 1401 aa5.31□□□□□ -1.56
HERC4-213ENST00000506515 CDHR2Q9BYE9 1310 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 MYH14Q7Z406 1995 aaKnown RBP5.3□□□□□ -1.56
HERC4-213ENST00000506515 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 OOEPA6NGQ2 149 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 FAM72CH0Y354 149 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 BLOC1S5-TXNDC5H3BN57 136 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 SLC30A4O14863 429 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 EPHB6O15197 1021 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 PCDH7O60245 1069 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 CLPTM1O96005 669 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD34CP0C6C1 535 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 CDX1P47902 265 aaPredicted RBP5.3□□□□□ -1.56
HERC4-213ENST00000506515 SULT2A1Q06520 285 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 SLMAPQ14BN4 828 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 CCDC158Q5M9N0 1113 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 FAM72AQ5TYM5 149 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 FAM72DQ6L9T8 149 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 PRR5LQ6MZQ0 368 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 UGT3A1Q6NUS8 523 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 CCDC91Q7Z6B0 441 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 PIGWQ7Z7B1 504 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 PHLDB2Q86SQ0 1253 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 FAM72BQ86X60 149 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 TUSC5Q8IXB3 177 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 CCDC170Q8IYT3 715 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 SYCP3Q8IZU3 236 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 KIRREL3Q8IZU9 778 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 SLC26A7Q8TE54 656 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 GIMAP5Q96F15 307 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 TESK2Q96S53 571 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 NDNQ99608 321 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 UTP14AQ9BVJ6 771 aaKnown RBP5.3□□□□□ -1.56
HERC4-213ENST00000506515 MTMR12Q9C0I1 747 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 C2orf40Q9H1Z8 148 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 MMADHCQ9H3L0 296 aaPredicted RBP5.3□□□□□ -1.56
HERC4-213ENST00000506515 INTS10Q9NVR2 710 aaKnown RBP5.3□□□□□ -1.56
HERC4-213ENST00000506515 GMEB2Q9UKD1 530 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 KIAA1551Q9HCM1 1747 aa5.3□□□□□ -1.56
HERC4-213ENST00000506515 CASP8AP2Q9UKL3 1982 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 TOGARAM1Q9Y4F4 1720 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 FER1L6Q2WGJ9 1857 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 C17orf105B2RV13 164 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 PRSS46E5RG02 174 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 F8VVB4 439 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 F8VWA3 439 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 BAG3O95817 575 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 C9P02748 559 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 GPIP06744 558 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 PRSS56P0CW18 603 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 CHRNB4P30926 498 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 COPB2P35606 906 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 MAGEA11P43364 429 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 FOLH1Q04609 750 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 TEFQ10587 303 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 OPCMLQ14982 345 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 TYSND1Q2T9J0 566 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 GPR33Q49SQ1 333 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 TMEM207Q6UWW9 146 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 C15orf39Q6ZRI6 1047 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 G2E3Q7L622 706 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 ANKRD33Q7Z3H0 272 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 NUP93Q8N1F7 819 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 OR2T11Q8NH01 316 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 CTCFLQ8NI51 663 aaPredicted RBP5.29□□□□□ -1.56
HERC4-213ENST00000506515 FIBINQ8TAL6 211 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 METTL21AQ8WXB1 218 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 SUSD6Q92537 303 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 C4orf45Q96LM5 186 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 GDAP1L1Q96MZ0 367 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 PGLYRP2Q96PD5 576 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 SDCBP2Q9H190 292 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 VPS18Q9P253 973 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 C19orf25Q9UFG5 118 aaPredicted RBP5.29□□□□□ -1.56
HERC4-213ENST00000506515 GRID1Q9ULK0 1009 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 RUVBL2Q9Y230 463 aaKnown RBP5.29□□□□□ -1.56
HERC4-213ENST00000506515 TCF19Q9Y242 345 aa5.29□□□□□ -1.56
HERC4-213ENST00000506515 TNRC18O15417 2968 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 O00370 1275 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 CTDSPLO15194 276 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 GLRA3O75311 464 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms