RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 IVDP26440 423 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 EEF1DP29692 281 aaKnown RBP23.2■■□□□ 1.3
HERC4-212ENST00000505760 SLC26A5P58743 744 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 OC90Q02509 493 aaPredicted RBP23.2■■□□□ 1.3
HERC4-212ENST00000505760 ART3Q13508 389 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 TRMT10BQ6PF06 316 aaKnown RBP23.2■■□□□ 1.3
HERC4-212ENST00000505760 SRRM1Q8IYB3 904 aaKnown RBP23.2■■□□□ 1.3
HERC4-212ENST00000505760 HORMAD2Q8N7B1 307 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 NT5CQ8TCD5 201 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 ITLN2Q8WWU7 325 aaPredicted RBP23.2■■□□□ 1.3
HERC4-212ENST00000505760 NPAS2Q99743 824 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 RUBCNLQ9H714 662 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 DYRK1BQ9Y463 629 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 PCNX1Q96RV3 2341 aa23.2■■□□□ 1.3
HERC4-212ENST00000505760 GABRR3A8MPY1 467 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 MAN1A2O60476 641 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 B4GALT2O60909 372 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 MLYCDO95822 493 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 B3GALT4O96024 378 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 TCP1P17987 556 aaKnown RBP23.19■■□□□ 1.3
HERC4-212ENST00000505760 SAT1P21673 171 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 AHRP35869 848 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 SCTRP47872 440 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 SPINK14Q6IE38 97 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 SBSNQ6UWP8 590 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 MRGPRGQ86SM5 289 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 CYP4X1Q8N118 509 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 TMEM178AQ8NBL3 297 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 PDLIM5Q96HC4 596 aaKnown RBP23.19■■□□□ 1.3
HERC4-212ENST00000505760 PWWP2AQ96N64 755 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 HES7Q9BYE0 225 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 SPNS1Q9H2V7 528 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 TRMT1Q9NXH9 659 aaKnown RBP23.19■■□□□ 1.3
HERC4-212ENST00000505760 CSMD1Q96PZ7 3565 aa23.19■■□□□ 1.3
HERC4-212ENST00000505760 URADA6NGE7 173 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 NDC80O14777 642 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 SLC19A2O60779 497 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 DNAJB6O75190 326 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 TNFRSF8P28908 595 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 HNF4AP41235 474 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 ALDH6A1Q02252 535 aaKnown RBP23.18■■□□□ 1.3
HERC4-212ENST00000505760 SYDE1Q6ZW31 735 aaPredicted RBP23.18■■□□□ 1.3
HERC4-212ENST00000505760 THOC6Q86W42 341 aaKnown RBP23.18■■□□□ 1.3
HERC4-212ENST00000505760 KLHL7Q8IXQ5 586 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 UTP15Q8TED0 518 aaKnown RBP23.18■■□□□ 1.3
HERC4-212ENST00000505760 LRRC39Q96DD0 335 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 MAGED4Q96JG8 741 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 PTCHD1Q96NR3 888 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 AIF1LQ9BQI0 150 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 CDCP1Q9H5V8 836 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 ZFATQ9P243 1243 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 KLF2Q9Y5W3 355 aaPredicted RBP23.18■■□□□ 1.3
HERC4-212ENST00000505760 TEX264Q9Y6I9 313 aa23.18■■□□□ 1.3
HERC4-212ENST00000505760 PRMT3O60678 531 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 REEP5Q00765 189 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 STEAP4Q687X5 459 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 RPTNQ6XPR3 784 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 TMPRSS11BQ86T26 416 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 RPS19BP1Q86WX3 136 aaKnown RBP23.17■■□□□ 1.3
HERC4-212ENST00000505760 LGI4Q8N135 537 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 ZNF808Q8N4W9 903 aaPredicted RBP23.17■■□□□ 1.3
HERC4-212ENST00000505760 FAM98AQ8NCA5 519 aaKnown RBP23.17■■□□□ 1.3
HERC4-212ENST00000505760 TRPV3Q8NET8 790 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 SCMH1Q96GD3 660 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 CAPZA3Q96KX2 299 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 UNKQ9C0B0 810 aaKnown RBP23.17■■□□□ 1.3
HERC4-212ENST00000505760 PELI2Q9HAT8 420 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 IKZF3Q9UKT9 509 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 KCNE2Q9Y6J6 123 aa23.17■■□□□ 1.3
HERC4-212ENST00000505760 PSMD12O00232 456 aaPredicted RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 WISP2O76076 250 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 PRF1P14222 555 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 ZNF37AP17032 561 aaPredicted RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 ARL4CP56559 192 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 RAB8AP61006 207 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 DR1Q01658 176 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 RBBP5Q15291 538 aaKnown RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 PPP1R3AQ16821 1122 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 KRTCAP3Q53RY4 240 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 NXPE4Q6UWF7 544 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 QSOX2Q6ZRP7 698 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 ANKMY2Q8IV38 441 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 KIF2BQ8N4N8 673 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 NKAPQ8N5F7 415 aaKnown RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 ELP5Q8TE02 316 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 THAP3Q8WTV1 239 aaPredicted RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 GPR137Q96N19 417 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 EGFL8Q99944 293 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 WDR83Q9BRX9 315 aaKnown RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 TSPAN10Q9H1Z9 355 aaPredicted RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 CLK4Q9HAZ1 481 aaKnown RBP23.16■■□□□ 1.3
HERC4-212ENST00000505760 LRFN1Q9P244 771 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 SLC22A14Q9Y267 594 aa23.16■■□□□ 1.3
HERC4-212ENST00000505760 NPEPPSL1A6NEC2 478 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 CDC7O00311 574 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 ESRRAP11474 423 aaPredicted RBP23.15■■□□□ 1.3
HERC4-212ENST00000505760 RNH1P13489 461 aaKnown RBP23.15■■□□□ 1.3
HERC4-212ENST00000505760 ITGA8P53708 1063 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 BTG2P78543 158 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 GALNTL5Q7Z4T8 443 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms