RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GABPB1Q06547 395 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CEP55Q53EZ4 464 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF542PQ5EBM4 170 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CASC1Q6TDU7 716 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 SATL1Q86VE3 508 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 AMZ2Q86W34 360 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 TDHQ8IZJ6 230 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 EID3Q8N140 333 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 SMYD1Q8NB12 490 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR2T12Q8NG77 320 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 DQX1Q8TE96 717 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 UBTD2Q8WUN7 234 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 SEPT8Q92599 483 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 FCGR1BQ92637 280 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 RPL36ALQ969Q0 106 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 C17orf77Q96MU5 243 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDCA3Q99618 268 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 POLR3CQ9BUI4 534 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 NTMT1Q9BV86 223 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 FICDQ9BVA6 458 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 NACA2Q9H009 215 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 TFB2MQ9H5Q4 396 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 SDR39U1Q9NRG7 319 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 EXOC1Q9NV70 894 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 DCAF16Q9NXF7 216 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 PTTG2Q9NZH5 202 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 COPS7AQ9UBW8 275 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CLIP2Q9UDT6 1046 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 IL36AQ9UHA7 158 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 LAMP5Q9UJQ1 280 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 RALYQ9UKM9 306 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 MGAT4BQ9UQ53 548 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 NCKAP1Q9Y2A7 1128 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMED7Q9Y3B3 224 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 DISP3Q9P2K9 1392 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 KIAA1217Q5T5P2 1943 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 HNRNPCL2B2RXH8 293 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 H3BNX3 289 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 RIPK2O43353 540 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 GMFGO60234 142 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 PALMO75781 387 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 NUDT17P0C025 328 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 THRBP10828 461 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CETPP11597 493 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CD59P13987 128 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 DAOP14920 347 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ANPEPP15144 967 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CA4P22748 312 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CA6P23280 308 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 EPHA2P29317 976 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 SRD5A2P31213 254 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 MAGEA11P43364 429 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 TRPC1P48995 793 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 TNFSF10P50591 281 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDH11P55287 796 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 HERV-K104P61576 105 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 TUBA1BP68363 451 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 OVGP1Q12889 678 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 SNX1Q13596 522 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDH18Q13634 790 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 RAPSNQ13702 412 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 PDIA5Q14554 519 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 LRRC23Q53EV4 343 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 C11orf87Q6NUJ2 197 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDHR3Q6ZTQ4 885 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF573Q86YE8 665 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ELP5Q8TE02 316 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 SAP25Q8TEE9 199 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 GANCQ8TET4 914 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF473Q8WTR7 871 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 SELENOMQ8WWX9 145 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 RBM41Q96IZ5 413 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 FCRL4Q96PJ5 515 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 TAAR6Q96RI8 345 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 GPA33Q99795 319 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCDC3Q9BQI4 270 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 UBAC1Q9BSL1 405 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 LRRC1Q9BTT6 524 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 LAT2Q9GZY6 243 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 SIRPDQ9H106 197 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 CSTL1Q9H114 145 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 GANQ9H2C0 597 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 DPEP2Q9H4A9 486 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 C5orf66Q9H5L9 145 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 DCLRE1BQ9H816 532 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZBTB20Q9HC78 741 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 RAVER2Q9HCJ3 691 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 VAT1LQ9HCJ6 419 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ECHDC1Q9NTX5 307 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 OCIAD1Q9NX40 245 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 COX16Q9P0S2 106 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 VPS54Q9P1Q0 977 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF624Q9P2J8 865 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 ENTPD4Q9Y227 616 aa3.54□□□□□ -1.84
TRAPPC13-208ENST00000505553 LOC101059948A0A1B0GTJ6 334 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCDC162PA2VCL2 907 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ASPDHA6ND91 283 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 E2F3O00716 465 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms