RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CUL1Q13616 776 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF268Q14587 947 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CA9Q16790 459 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PHKG1Q16816 387 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 EXOC3L2Q2M3D2 409 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ANKRD55Q3KP44 614 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC9C1Q4G0N8 1177 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PHLDA2Q53GA4 152 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF311Q5JNZ3 666 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PRAMEF5Q5TYX0 476 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ABHD17BQ5VST6 288 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PRAMEF6Q5VXH4 476 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TTC23Q5W5X9 447 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 SEL1L3Q68CR1 1132 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TYW3Q6IPR3 259 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 KDM7AQ6ZMT4 941 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 DEF8Q6ZN54 512 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM57BQ71RH2 274 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 EIF3MQ7L2H7 374 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF367Q7RTV3 350 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 YRDCQ86U90 279 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZDHHC17Q8IUH5 632 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ARHGEF19Q8IW93 802 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TDHQ8IZJ6 230 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 GBGT1Q8N5D6 347 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ARFGAP2Q8N6H7 521 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TTC9BQ8N6N2 239 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TRPV3Q8NET8 790 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR14A16Q8NHC5 309 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC2A14Q8TDB8 520 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CACTINQ8WUQ7 758 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 GLYATL1Q969I3 302 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 MCHR2Q969V1 340 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 FUBP1Q96AE4 644 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 KIAA1143Q96AT1 154 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 COQ8BQ96D53 544 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRR1Q96L50 414 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ATP6V1G3Q96LB4 118 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 GPR137Q96N19 417 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PRMT1Q99873 361 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC39A3Q9BRY0 314 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 BTBD10Q9BSF8 475 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 URM1Q9BTM9 101 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMEM43Q9BTV4 400 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 MIS12Q9H081 205 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 MAGT1Q9H0U3 335 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 DDX28Q9NUL7 540 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PARPBPQ9NWS1 579 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 UBAP1Q9NZ09 502 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 HACD3Q9P035 362 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 SUN2Q9UH99 717 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CRLS1Q9UJA2 301 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 MRTO4Q9UKD2 239 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 FZD10Q9ULW2 581 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 FOXJ3Q9UPW0 622 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 IFT52Q9Y366 437 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 YIPF1Q9Y548 306 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 N6AMT1Q9Y5N5 214 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 COLEC10Q9Y6Z7 277 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 COMMD3-BMI1R4GMX3 469 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PRAG1Q86YV5 1406 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 KIF7Q2M1P5 1343 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ATXN2Q99700 1313 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 NPC1L1Q9UHC9 1359 aa3.4□□□□□ -1.86
HMGB1P22-201ENST00000505315 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 METTL21EPA6NDL7 271 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 BTBD17A6NE02 478 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 CASTOR2A6NHX0 329 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 LRRC3CA6NJW4 275 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 C15orf62A8K5M9 175 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SUPT3HB4E1H0 165 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ANKRD66B4E2M5 251 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 MSTNO14793 375 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 HSPA12AO43301 675 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 SDC3O75056 442 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 BCAS1O75363 584 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 E2F6O75461 281 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 UFL1O94874 794 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 H1F0P07305 194 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 F7P08709 466 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 HIST1H2AGP0C0S8 130 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 PABPC4LP0CB38 370 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 UBTFL6P0CB48 400 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 GSTT2P0CG29 244 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 GSTT2BP0CG30 244 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 HNF1AP20823 631 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 UQCRC2P22695 453 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 NR4A1P22736 598 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 DGKAP23743 735 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZFP36P26651 326 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 GRIA1P42261 906 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 NKX2-1P43699 371 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACADSBP45954 432 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPS18P62269 152 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPL23AP62750 156 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 BNC1Q01954 994 aa3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 EEF1A2Q05639 463 aaKnown RBP3.4□□□□□ -1.87
HMGB1P22-201ENST00000505315 PJVKQ0ZLH3 352 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms