RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	C7orf26	Q96N11	449 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TEFM	Q96QE5	360 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	HBEGF	Q99075	208 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MTERF1	Q99551	399 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CTRC	Q99895	268 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	AIF1L	Q9BQI0	150 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SLC29A3	Q9BZD2	475 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ACPT	Q9BZG2	426 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SHCBP1L	Q9BZQ2	653 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	IQCG	Q9H095	443 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MANSC1	Q9H8J5	431 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ACTR8	Q9H981	624 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	KCMF1	Q9P0J7	381 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	DHCR7	Q9UBM7	475 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	EXO1	Q9UQ84	846 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	RAP2C	Q9Y3L5	183 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	DYRK1B	Q9Y463	629 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	PCDHGA11	Q9Y5H2	935 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MED13	Q9UHV7	2174 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ACACB	O00763	2458 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MAP1B	P46821	2468 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CACNA1G	O43497	2377 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	DOCK10	Q96BY6	2186 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	HYKK	A2RU49	373 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TMX2-CTNND1	H3BSU7	103 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	AGRP	O00253	132 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	FFAR3	O14843	346 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CLGN	O14967	610 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	AZIN1	O14977	448 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	LSM1	O15116	133 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	POLR1C	O15160	346 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	GPR42	O15529	346 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ZSCAN9	O15535	394 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	EFS	O43281	561 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	BRINP1	O60477	761 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	GALR3	O60755	368 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	EDF1	O60869	148 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	KLF7	O75840	302 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	OR2B3	O76000	313 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	S100B	P04271	92 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ENO1	P06733	434 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	UROS	P10746	265 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	WT1	P19544	449 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	F8A1	P23610	371 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TPP2	P29144	1249 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SLC5A2	P31639	672 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CSTF2	P33240	577 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MDH1	P40925	334 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	HK2	P52789	917 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ARFIP1	P53367	373 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	GYS2	P54840	703 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ITGA1	P56199	1179 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	FOXL2	P58012	376 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	RAB15	P59190	212 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	RPS13	P62277	151 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	GABRE	P78334	506 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	GUCY1A3	Q02108	690 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	FOXC1	Q12948	553 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	LAPTM5	Q13571	262 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TCTE1	Q5JU00	501 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	C10orf62	Q5T681	223 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	GARNL3	Q5VVW2	1013 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TLDC1	Q6P9B6	456 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	FAM198B	Q6UWH4	519 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MILR1	Q7Z6M3	343 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	PPP1R3B	Q86XI6	285 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CLYBL	Q8N0X4	340 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ZNF655	Q8N720	491 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CSNK1A1L	Q8N752	337 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SNX31	Q8N9S9	440 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CCDC63	Q8NA47	563 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TRPV3	Q8NET8	790 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	OR2L5	Q8NG80	312 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CHTF18	Q8WVB6	975 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MVB12A	Q96EY5	273 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MAGEB18	Q96M61	343 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	F2RL3	Q96RI0	385 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TAAR9	Q96RI9	348 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SPSB2	Q99619	263 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SELENOS	Q9BQE4	189 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MESP1	Q9BRJ9	268 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SORBS1	Q9BX66	1292 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SLC26A1	Q9H2B4	701 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	OR51B5	Q9H339	312 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	ACTL8	Q9H568	366 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SYNDIG1	Q9H7V2	258 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	DDX31	Q9H8H2	851 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	BRF2	Q9HAW0	419 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	MID1IP1	Q9NPA3	183 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	INTS9	Q9NV88	658 aa	Known RBP	4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	PNPO	Q9NVS9	261 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	THAP1	Q9NVV9	213 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	SOHLH2	Q9NX45	425 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	PISD	Q9UG56	409 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	TRAF6	Q9Y4K3	522 aa		4.69	□□□□□ -1.66
LMNB1-208	ENST00000504788	CROCC	Q5TZA2	2017 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms