RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ZNF841Q6ZN19 808 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PAQR9Q6ZVX9 377 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 GTPBP8Q8N3Z3 284 aaPredicted RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF781Q8N8C0 355 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ENGASEQ8NFI3 743 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 OR2AJ1Q8NGZ0 328 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF461Q8TAF7 563 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 RHEBL1Q8TAI7 183 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 FAM110BQ8TC76 370 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 MRGPRFQ96AM1 343 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 TM4SF19Q96DZ7 209 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PPP1R16AQ96I34 528 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 AJUBAQ96IF1 538 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 SPAG8Q99932 426 aaPredicted RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 KLHL28Q9NXS3 571 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF510Q9Y2H8 683 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 MAU2Q9Y6X3 613 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 A0A0U1RQS6 177 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PLSCR5A0PG75 271 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TRIM3O75382 744 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SEMA3DO95025 777 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SCELO95171 688 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PIGRP01833 764 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PPP3CBP16298 524 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 ITGB5P18084 799 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 LIMK2P53671 638 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CASP8Q14790 479 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 UGCGQ16739 394 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TMEM44Q2T9K0 475 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TSPAN33Q86UF1 283 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TDHQ8IZJ6 230 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SLC38A6Q8IZM9 456 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 NECAB1Q8N987 351 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 OR52L2PQ8NGH6 319 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 DTX3LQ8TDB6 740 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 HSD17B8Q92506 261 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SLCO4A1Q96BD0 722 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SELENOSQ9BQE4 189 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SPZ1Q9BXG8 430 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PKIBQ9C010 78 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MTIF3Q9H2K0 278 aaKnown RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 IL17RBQ9NRM6 502 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SLC39A1Q9NY26 324 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 RHCGQ9UBD6 479 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 DPPA5A6NC42 116 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 HEPACAM2A8MVW5 462 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 DUX1O43812 170 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PDE5AO76074 875 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CALCAP01258 141 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 RRASP10301 218 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MLNP12872 115 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TAL1P17542 331 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 IGFBP2P18065 325 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 RORAP35398 523 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CHI3L1P36222 383 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SLC18A2Q05940 514 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 RNASEKQ6P5S7 137 aaKnown RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SPPL2CQ8IUH8 684 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 COLGALT1Q8NBJ5 622 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SDR9C7Q8NEX9 313 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TBC1D16Q8TBP0 767 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MCUR1Q96AQ8 359 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 RSPRY1Q96DX4 576 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 DUX5Q96PT3 197 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 ACOX2Q99424 681 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MXRA8Q9BRK3 442 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 ELOVL3Q9HB03 270 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 LRRC4Q9HBW1 653 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PDGFCQ9NRA1 345 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MRPL17Q9NRX2 175 aaKnown RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CPED1A4D0V7 1026 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 VAMP5O95183 116 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CLDN7O95471 211 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SPP1P10451 314 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 FBLN1P23142 703 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PPP2R1BP30154 601 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 GDI2P50395 445 aaKnown RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 ERVFRD-1P60508 538 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CYP4F2P78329 520 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PSG6Q00889 435 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PJVKQ0ZLH3 352 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TRAP1Q12931 704 aaKnown RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 SYTL3Q4VX76 610 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TMEM31Q5JXX7 168 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CBLN3Q6UW01 205 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 EXD3Q8N9H8 876 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TTC29Q8NA56 475 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 HMGCLL1Q8TB92 370 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 PAQR8Q8TEZ7 354 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 MYLIPQ8WY64 445 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 FAM136AQ96C01 138 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CHMP6Q96FZ7 201 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 ZBED3Q96IU2 234 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 CASD1Q96PB1 797 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 FAM213AQ9BRX8 229 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 C16orf70Q9BSU1 422 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 FNDC11Q9BVV2 318 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 TSPYL1Q9H0U9 437 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms