RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CDONQ4KMG0 1287 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RAB41Q5JT25 222 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 IER5LQ5T953 404 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SBSNQ6UWP8 590 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF852Q6ZMS4 543 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SZRD1Q7Z422 152 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TMEM86AQ8N2M4 240 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 DNAJC5GQ8N7S2 189 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SIMC1Q8NDZ2 872 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 BEST4Q8NFU0 473 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 PGAP3Q96FM1 320 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZIC5Q96T25 663 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 SLC22A4Q9H015 551 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 FAM83DQ9H4H8 585 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CLMPQ9H6B4 373 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CCSER2Q9H7U1 834 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF556Q9HAH1 456 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 ACOXLQ9NUZ1 547 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 TMEM161AQ9NX61 479 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CRNNQ9UBG3 495 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RAB23Q9ULC3 237 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 NDRG2Q9UN36 371 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CFL2Q9Y281 166 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 RAI2Q9Y5P3 530 aa7.35□□□□□ -1.23
NEDD9-208ENST00000504387 CFAP20Q9Y6A4 193 aaKnown RBP7.35□□□□□ -1.23
NEDD9-208ENST00000504387 C5orf42Q9H799 3197 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 LOC285095A0A1B0GVY8 99 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SYNDIG1LA6NDD5 238 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ISM1B1AKI9 464 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HNRNPCL2B2RXH8 293 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 STX16O14662 325 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SH3BP5O60239 455 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 AOC2O75106 756 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ENTPD6O75354 484 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 NPPAP01160 153 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 FGF1P05230 155 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ITGA2P17301 1181 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SDC1P18827 310 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 TIE1P35590 1138 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 RPL6Q02878 288 aaKnown RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HYAL2Q12891 473 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 GRIK2Q13002 908 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 PTGES3Q15185 160 aaKnown RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 WSCD2Q2TBF2 565 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 OR2G6Q5TZ20 316 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 TRIQKQ629K1 86 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 PLEKHM3Q6ZWE6 761 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 AQP11Q8NBQ7 271 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 OTUB1Q96FW1 271 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 RNF170Q96K19 258 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 CCDC115Q96NT0 180 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 PARK7Q99497 189 aaKnown RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ACAT2Q9BWD1 397 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HDHD2Q9H0R4 259 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SLA2Q9H6Q3 261 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SLAMF7Q9NQ25 335 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 GKN1Q9NS71 199 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 OLA1Q9NTK5 396 aaKnown RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HCSTQ9UBK5 93 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 UBA2Q9UBT2 640 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 PTCH2Q9Y6C5 1203 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 CKAP5Q14008 2032 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 MAGEB17A8MXT2 336 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 LZTS3O60299 673 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 OR7A10O76100 309 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HRGP04196 525 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 DDCP20711 480 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 LPOP22079 712 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SLC9A3P48764 834 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 RORCP51449 518 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ABHD18Q0P651 414 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 DUSP4Q13115 394 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 TBCEQ15813 527 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 FXNQ16595 210 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HKDC1Q2TB90 917 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 COX20Q5RI15 118 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 FRMPD2BQ6IN97 320 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 TUBA3EQ6PEY2 450 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 AFTPHQ6ULP2 937 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 OLIG3Q7RTU3 272 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 FAM124AQ86V42 546 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SLC37A3Q8NCC5 494 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 FAM129BQ96TA1 746 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 DPCDQ9BVM2 203 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ASB8Q9H765 288 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 TPT1P8Q9HAU6 139 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 PRDM5Q9NQX1 630 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-208ENST00000504387 SLC22A14Q9Y267 594 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 HCN4Q9Y3Q4 1203 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 TRPV2Q9Y5S1 764 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 V9GYH0 126 aa7.34□□□□□ -1.23
NEDD9-208ENST00000504387 ATP6V1G2-DDX39BF2Z307 99 aa7.33□□□□□ -1.24
NEDD9-208ENST00000504387 PLK4O00444 970 aa7.33□□□□□ -1.24
NEDD9-208ENST00000504387 PDE9AO76083 593 aa7.33□□□□□ -1.24
NEDD9-208ENST00000504387 HLA-EP13747 358 aa7.33□□□□□ -1.24
NEDD9-208ENST00000504387 GJA1P17302 382 aa7.33□□□□□ -1.24
NEDD9-208ENST00000504387 PSMA1P25786 263 aaKnown RBP7.33□□□□□ -1.24
NEDD9-208ENST00000504387 SOAT1P35610 550 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms