RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 NPHS1O60500 1241 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SCRG1O75711 98 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CTSBP07858 339 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SLC35G6P0C7Q6 338 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 PCNAP12004 261 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 NR1D1P20393 614 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 BGNP21810 368 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 AHRP35869 848 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 PKNOX1P55347 436 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 WDR4P57081 412 aaKnown RBP9.56□□□□□ -0.88
NUP54-203ENST00000504173 CYP4F2P78329 520 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 E2F2Q14209 437 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 GRM7Q14831 915 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CHI3L2Q15782 390 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CPSF6Q16630 551 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUP54-203ENST00000504173 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUP54-203ENST00000504173 GGTA1PQ4G0N0 100 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 WASHC2DQ5SRD0 308 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 TTC19Q6DKK2 380 aaPredicted RBP9.56□□□□□ -0.88
NUP54-203ENST00000504173 PWWP2BQ6NUJ5 590 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 LETMD1Q6P1Q0 360 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 GPRIN3Q6ZVF9 776 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 VN1R4Q7Z5H5 301 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SYVN1Q86TM6 617 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 ZNF655Q8N720 491 aaPredicted RBP9.56□□□□□ -0.88
NUP54-203ENST00000504173 ANKRD53Q8N9V6 530 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 L3MBTL4Q8NA19 623 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CAMKVQ8NCB2 501 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 OR4F6Q8NGB9 312 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SLC13A3Q8WWT9 602 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CCT6BQ92526 530 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 REPS1Q96D71 796 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 RNF31Q96EP0 1072 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CNDP1Q96KN2 507 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 ZNF285Q96NJ3 590 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SLC46A1Q96NT5 459 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 TRMOQ9BU70 441 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 NTMT1Q9BV86 223 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SLC7A5P2Q9GIP4 190 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 EPN3Q9H201 632 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 SYNPO2LQ9H987 977 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 FOXJ2Q9P0K8 574 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 TRPS1Q9UHF7 1281 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 ZFP69BQ9UJL9 534 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 AP1M2Q9Y6Q5 423 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 CELSR1Q9NYQ6 3014 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
NUP54-203ENST00000504173 MDC1Q14676 2089 aaKnown RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 ABCA2Q9BZC7 2435 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 A0A1B0GTL3 188 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 HYKKA2RU49 373 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 CDRT15L2A8MXV6 281 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 H0YIV9 168 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 H3BMH7 237 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 H3BQF6 201 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 FFAR3O14843 346 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 NVLO15381 856 aaKnown RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 GPR42O15529 346 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 NDUFS4O43181 175 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ZNF749O43361 778 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 CPNE3O75131 537 aaKnown RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 CRCPO75575 148 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 KIAA0754O94854 1291 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 OR4F21O95013 312 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 TIAF1O95411 115 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ESRRBO95718 433 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 SERPINE1P05121 402 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ZNF28P17035 718 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 GSTM2P28161 218 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 HMOX2P30519 316 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 SERPINB1P30740 379 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 SLC5A2P31639 672 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 SERPINB5P36952 375 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 PHEXP78562 749 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 RGS1Q08116 209 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 IFT88Q13099 833 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 DDX39BQ13838 428 aaKnown RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 RCN2Q14257 317 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ZRSR2Q15696 482 aaKnown RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 HKDC1Q2TB90 917 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 PRTGQ2VWP7 1150 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 PRAMEF17Q5VTA0 474 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 YOD1Q5VVQ6 348 aaPredicted RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 LAS2Q8IYD9 372 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 CDYL2Q8N8U2 506 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 TRPV3Q8NET8 790 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 OR7G3Q8NG95 312 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 DYDC1Q8WWB3 177 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 TM4SF19Q96DZ7 209 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 MACROD1Q9BQ69 325 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ARHGAP9Q9BRR9 750 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 NDC1Q9BTX1 674 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ULBP3Q9BZM4 244 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 SHCBP1LQ9BZQ2 653 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 B3GNT4Q9C0J1 378 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ELOVL6Q9H5J4 265 aa9.55□□□□□ -0.88
NUP54-203ENST00000504173 ACTR5Q9H9F9 607 aaPredicted RBP9.55□□□□□ -0.88
NUP54-203ENST00000504173 EML4Q9HC35 981 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms