RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PRMT3O60678 531 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 AVILO75366 819 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SLC25A12O75746 678 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 HAUS5O94927 633 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SYF2O95926 243 aaKnown RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 KRT14P02533 472 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SERPINA6P08185 405 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 CCDC175P0C221 793 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ABOP16442 354 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ZNF24P17028 368 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 IL1RNP18510 177 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PGAM1P18669 254 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 HPDP32754 393 aaPredicted RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PEX19P40855 299 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 KIR3DL1P43629 444 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SCTRP47872 440 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 KCNJ1P48048 391 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 GPR143P51810 404 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 HSD17B7P56937 341 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 OR4D2P58180 307 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SNRPNP63162 240 aaKnown RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 CDKL1Q00532 357 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PMP22Q01453 160 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SRSF11Q05519 484 aaKnown RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ACTN3Q08043 901 aaPredicted RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 RGS1Q08116 209 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 GPS1Q13098 491 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 CUL1Q13616 776 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 FRG1Q14331 258 aaKnown RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 CASC4Q6P4E1 433 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 CES3Q6UWW8 571 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PRSS41Q7RTY9 318 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PIWIL4Q7Z3Z4 852 aaKnown RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 GALNTL5Q7Z4T8 443 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PLD3Q8IV08 490 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 KLHDC8AQ8IYD2 350 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 CPNE9Q8IYJ1 553 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 MYO1HQ8N1T3 1032 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 KCT2Q8NC54 265 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 APCDD1LQ8NCL9 501 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ZNF740Q8NDX6 193 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TRPV3Q8NET8 790 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 B3GNT7Q8NFL0 401 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TTLQ8NG68 377 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 FAM57AQ8TBR7 257 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 AGAP11Q8TF27 550 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 EEF1AKMT1Q8WVE0 214 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ASB5Q8WWX0 329 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SLCO2A1Q92959 643 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TMEM125Q96AQ2 219 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 FBXL8Q96CD0 374 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 SNF8Q96H20 258 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PBKQ96KB5 322 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TRIM54Q9BYV2 358 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TP63Q9H3D4 680 aaPredicted RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PELI2Q9HAT8 420 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PRDM9Q9NQV7 894 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 FBXO6Q9NRD1 293 aaPredicted RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 C20orf96Q9NUD7 363 aaPredicted RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 COQ3Q9NZJ6 369 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 HCN3Q9P1Z3 774 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TNFRSF10DQ9UBN6 386 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TRMT6Q9UJA5 497 aaKnown RBP5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 TINAGQ9UJW2 476 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ADAMTS6Q9UKP5 1117 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 PCDHGB3Q9Y5G1 929 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 MAD1L1Q9Y6D9 718 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 DCHS2Q6V1P9 2916 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ADGRG4Q8IZF6 3080 aa5.72□□□□□ -1.49
LSM3P4-201ENST00000502948 ANKRD17O75179 2603 aaKnown RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 OR14I1A6ND48 311 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NPIPA5E9PKD4 350 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 C19orf84I3L1E1 186 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CES2O00748 559 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NDC80O14777 642 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NDUFS4O43181 175 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CHST10O43529 356 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NRDCO43847 1150 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CEP104O60308 925 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 MAN1A2O60476 641 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 RDH16O75452 317 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 F10P00742 488 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 RNH1P13489 461 aaKnown RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 GABRB3P28472 473 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 TPP2P29144 1249 aaPredicted RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 COILP38432 576 aaPredicted RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 FNTAP49354 379 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 HNMTP50135 292 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CLCN2P51788 898 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 IL2P60568 153 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 OC90Q02509 493 aaPredicted RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 TFF3Q07654 80 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 HYAL2Q12891 473 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NAE1Q13564 534 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 TSTA3Q13630 321 aaPredicted RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PHKG1Q16816 387 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 HYAL4Q2M3T9 481 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 HSP90AA5PQ58FG0 334 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 SPANXN3Q5MJ09 141 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms