RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 NAALAD2Q9Y3Q0 740 aa11.51□□□□□ -0.57
NUP54-202ENST00000502850 MYO1GB0I1T2 1018 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 M0QX08 132 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 MMP20O60882 483 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 GPR37L1O60883 481 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 B3GALT4O96024 378 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 FURINP09958 794 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 ZNF8P17098 575 aaPredicted RBP11.5□□□□□ -0.57
NUP54-202ENST00000502850 ITIH1P19827 911 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 CCNA2P20248 432 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 YAP1P46937 504 aaKnown RBP11.5□□□□□ -0.57
NUP54-202ENST00000502850 CSNK2BP67870 215 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 HPCAP84074 193 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 IL5RAQ01344 420 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 TSTA3Q13630 321 aaPredicted RBP11.5□□□□□ -0.57
NUP54-202ENST00000502850 CAMK1Q14012 370 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 FAM78AQ5JUQ0 283 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 GCNT6Q5T4J0 391 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 TMEM179BQ7Z7N9 219 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 LRRTM4Q86VH4 590 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 AMZ2Q86W34 360 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 LRRC56Q8IYG6 542 aaPredicted RBP11.5□□□□□ -0.57
NUP54-202ENST00000502850 CHPFQ8IZ52 775 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 SPARTQ8N0X7 666 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP54-202ENST00000502850 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 COX14Q96I36 57 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 QRFPRQ96P65 431 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 NODALQ96S42 347 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 FAM129BQ96TA1 746 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 DOHHQ9BU89 302 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 OR52A5Q9H2C5 316 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 TMEM38AQ9H6F2 299 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 TRPV4Q9HBA0 871 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 PLGRKTQ9HBL7 147 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 KRT84Q9NSB2 600 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 DZANK1Q9NVP4 752 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 CDC14AQ9UNH5 594 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 ABCG2Q9UNQ0 655 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 ASF1AQ9Y294 204 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 PCDHGB3Q9Y5G1 929 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 PCDHGB1Q9Y5G3 927 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 U3KQV3 271 aa11.5□□□□□ -0.57
NUP54-202ENST00000502850 HEPACAM2A8MVW5 462 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ANGPTL1O95841 491 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ERGP11308 486 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 HLA-EP13747 358 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 IL7RP16871 459 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 FSHRP23945 695 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TEAD1P28347 426 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 EIF2DP41214 584 aaKnown RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 VIPR2P41587 438 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 MVKQ03426 396 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 MEP1AQ16819 746 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ZNF630Q2M218 657 aaPredicted RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 CATSPEREQ5SY80 951 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 KIAA1614Q5VZ46 1190 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 CRTC3Q6UUV7 619 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TMIGD1Q6UXZ0 262 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 CCDC80Q76M96 950 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 PAGE2Q7Z2X7 111 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TRIM74Q86UV6 250 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TSPYL5Q86VY4 417 aaPredicted RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 C17orf64Q86WR6 236 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ZNF547Q8IVP9 402 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 HS3ST5Q8IZT8 346 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 SVOPQ8N4V2 548 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ATG16L2Q8NAA4 619 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 C16orf78Q8WTQ4 265 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 RSPRY1Q96DX4 576 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 AIF1LQ9BQI0 150 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 SLC35A5Q9BS91 424 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ZDHHC5Q9C0B5 715 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 RIBC2Q9H4K1 309 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 GPN2Q9H9Y4 310 aaPredicted RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 THUMPD1Q9NXG2 353 aaKnown RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 LMCD1Q9NZU5 365 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 PDP1Q9P0J1 537 aaPredicted RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 ENOPH1Q9UHY7 261 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 GMPPBQ9Y5P6 360 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TRANK1O15050 2925 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 A8MVJ9 347 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 hCG_2039718K7EN88 272 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 K7ESM1 405 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TBX19O60806 448 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 JUNDP17535 347 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 SLC6A11P48066 632 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 PRIM2P49643 509 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 VLDLRP98155 873 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 C2orf80Q0P641 193 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 CDK5R2Q13319 367 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 GAB1Q13480 694 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 GPM6BQ13491 265 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 NFE2L1Q14494 772 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 GAB4Q2WGN9 574 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 IFI44LQ53G44 452 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms