RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ACP1P24666 158 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 CNN1P51911 297 aaKnown RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 HNRNPFP52597 415 aaKnown RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZXDBP98169 803 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 GPR17Q13304 367 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 GK2Q14410 553 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 CCDC40Q4G0X9 1142 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 XKR6Q5GH73 641 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLC25A53Q5H9E4 307 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 TECRLQ5HYJ1 363 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 DLEU7Q6UYE1 221 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 RBM43Q6ZSC3 357 aaKnown RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 G2E3Q7L622 706 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 COX8CQ7Z4L0 72 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 RBM23Q86U06 439 aaKnown RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 MAB21L3Q8N8X9 362 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 POC1AQ8NBT0 407 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 HAS2Q92819 552 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 CD101Q93033 1021 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMEM143Q96AN5 459 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 KCNK16Q96T55 309 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZNF577Q9BSK1 485 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 FAM49AQ9H0Q0 323 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 PIGVQ9NUD9 493 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 CLCA3PQ9Y6N3 262 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 KIF21BO75037 1637 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ABCA9Q8IUA7 1624 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 CD109Q6YHK3 1445 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 GREB1LQ9C091 1923 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 RGSL1A5PLK6 1076 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 FPGTO14772 594 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 RASGRF2O14827 1237 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 EPHB6O15197 1021 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 SMAD6O43541 496 aaKnown RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ATP6V1G1O75348 118 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 CLN5O75503 358 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 CDK2AP2O75956 126 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 TRIM16O95361 564 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 GUCA1CO95843 209 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 TGFAP01135 160 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 PGK2P07205 417 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 NUDT17P0C025 328 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 GHRP10912 638 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 RPA1P27694 616 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 RBMS1P29558 406 aaKnown RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 DCTP40126 519 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ASMTP46597 345 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 CAMLGP49069 296 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 DNA2P51530 1060 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 CLCN4P51793 760 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 GMFBP60983 142 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 KEAP1Q14145 624 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 C12orf60Q5U649 245 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 OR6B2Q6IFH4 312 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZCCHC12Q6PEW1 402 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ISLR2Q6UXK2 745 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF444Q8N0Y2 327 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 SIDT2Q8NBJ9 832 aaKnown RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 SEPT8Q92599 483 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF354BQ96LW1 612 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 GUCD1Q96NT3 240 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 TSGA13Q96PP4 275 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 NTMT1Q9BV86 223 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 LRRC2Q9BYS8 371 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 NYXQ9GZU5 481 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ABCG4Q9H172 646 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 DPEP2Q9H4A9 486 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 BICC1Q9H694 974 aaKnown RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 LIN28AQ9H9Z2 209 aaKnown RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 GPN1Q9HCN4 374 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 PPANQ9NQ55 473 aaKnown RBP4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 OR6C2Q9NZP2 312 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 GRID1Q9ULK0 1009 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 SH3GLB1Q9Y371 365 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 ATP6V0A2Q9Y487 856 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 COLEC10Q9Y6Z7 277 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 SMCHD1A6NHR9 2005 aa4.77□□□□□ -1.65
HMGB1P3-201ENST00000502802 CCDC162PA2VCL2 907 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 SLC22A2O15244 555 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 SSX5O60225 188 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 KIF5CO60282 957 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 KRT33AO76009 404 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 CHRNGP07510 517 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 CEACAM8P31997 349 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 KIF5BP33176 963 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 IRX4P78413 519 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 CDH18Q13634 790 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 TRIM29Q14134 588 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 GIT2Q14161 759 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 EXT1Q16394 746 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 IZUMO4Q1ZYL8 232 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 PSRC1Q6PGN9 363 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 DHRS11Q6UWP2 260 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 WDR88Q6ZMY6 472 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 TAF8Q7Z7C8 310 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 PIGZQ86VD9 579 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 HSCBQ8IWL3 235 aa4.76□□□□□ -1.65
HMGB1P3-201ENST00000502802 STHQ8IWL8 128 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms