RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 IQCGQ9H095 443 aaKnown RBP15.9■□□□□ 0.14
PRKCB-210ENST00000498739 RHBGQ9H310 441 aa15.9■□□□□ 0.14
PRKCB-210ENST00000498739 C12orf65Q9H3J6 166 aaKnown RBP15.9■□□□□ 0.14
PRKCB-210ENST00000498739 KLHL31Q9H511 634 aa15.9■□□□□ 0.14
PRKCB-210ENST00000498739 ZBTB26Q9HCK0 441 aa15.9■□□□□ 0.14
PRKCB-210ENST00000498739 ACSS2Q9NR19 701 aa15.9■□□□□ 0.14
PRKCB-210ENST00000498739 HCN3Q9P1Z3 774 aa15.9■□□□□ 0.14
PRKCB-210ENST00000498739 NXT1Q9UKK6 140 aaKnown RBP15.9■□□□□ 0.14
PRKCB-210ENST00000498739 MAP4K5Q9Y4K4 846 aa15.9■□□□□ 0.14
PRKCB-210ENST00000498739 MDC1Q14676 2089 aaKnown RBP15.9■□□□□ 0.14
PRKCB-210ENST00000498739 RGS16O15492 202 aaPredicted RBP15.89■□□□□ 0.13
PRKCB-210ENST00000498739 UGDHO60701 494 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 RDH16O75452 317 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 SUPT7LO94864 414 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 CLDN9O95484 217 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 B3GALT4O96024 378 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 TSPAN8P19075 237 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 CDH13P55290 713 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 RBBP7Q16576 425 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 VWA2Q5GFL6 755 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 ZNF678Q5SXM1 525 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 ZYG11AQ6WRX3 759 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 RAB43Q86YS6 212 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 AFAP1L2Q8N4X5 818 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 BANPQ8N9N5 519 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 OR7G3Q8NG95 312 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 EXTL1Q92935 676 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 SMC6Q96SB8 1091 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 C1QTNF3Q9BXJ4 246 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 AICDAQ9GZX7 198 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 CENPHQ9H3R5 247 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 MKKSQ9NPJ1 570 aaPredicted RBP15.89■□□□□ 0.13
PRKCB-210ENST00000498739 MKS1Q9NXB0 559 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 POLHQ9Y253 713 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 RNF11Q9Y3C5 154 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 LAMA5O15230 3695 aa15.89■□□□□ 0.13
PRKCB-210ENST00000498739 KMT2BQ9UMN6 2715 aaPredicted RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 IGLV3-12A0A075B6K2 115 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 VSTM2BA6NLU5 285 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 C4orf51C9J302 202 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 G3V2L1 256 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 GALR3O60755 368 aaPredicted RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 SPAG7O75391 227 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 ITGB2P05107 769 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 UMODP07911 640 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 ZGLP1P0C6A0 271 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 IMPDH1P20839 514 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 HNRNPH1P31943 449 aaKnown RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 PRKAA2P54646 552 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 SKP1P63208 163 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 KLC1Q07866 573 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 TRAF3Q13114 568 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 DDX39BQ13838 428 aaKnown RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 SSPNQ14714 243 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 CPSF6Q16630 551 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 TBR1Q16650 682 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 UNC50Q53HI1 259 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 BEND6Q5SZJ8 279 aaPredicted RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 NIPAL1Q6NVV3 410 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 L3MBTL4Q8NA19 623 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 RDH11Q8TC12 318 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 ADAMTS17Q8TE56 1095 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 TRPC4APQ8TEL6 797 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 ZNF473Q8WTR7 871 aaKnown RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 GAL3ST3Q96A11 431 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 CCDC126Q96EE4 140 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 CRB3Q9BUF7 120 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 NTMT1Q9BV86 223 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 REXO4Q9GZR2 422 aaKnown RBP15.88■□□□□ 0.13
PRKCB-210ENST00000498739 C14orf105Q9NVL8 296 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 MAN2B2Q9Y2E5 1009 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 PCDHGA11Q9Y5H2 935 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 EPG5Q9HCE0 2579 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 FER1L5A0AVI2 2057 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 PKD1L2Q7Z442 2459 aa15.88■□□□□ 0.13
PRKCB-210ENST00000498739 A0A0G2JN53 185 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 LRIT2A6NDA9 550 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 ERI3O43414 337 aaKnown RBP15.87■□□□□ 0.13
PRKCB-210ENST00000498739 SH3BGRLO75368 114 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 TBX6O95947 436 aaPredicted RBP15.87■□□□□ 0.13
PRKCB-210ENST00000498739 OTCP00480 354 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 SMIM10L1P0DMW3 83 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 CPA3P15088 417 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 SERPINB1P30740 379 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 HPDP32754 393 aaPredicted RBP15.87■□□□□ 0.13
PRKCB-210ENST00000498739 PLA2G16P53816 162 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 OLR1P78380 273 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 CLCQ05315 142 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
PRKCB-210ENST00000498739 BORAQ6PGQ7 559 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 LRIG3Q6UXM1 1119 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 MILR1Q7Z6M3 343 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 ZC3H7AQ8IWR0 971 aaKnown RBP15.87■□□□□ 0.13
PRKCB-210ENST00000498739 SHISA5Q8N114 240 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 RNF175Q8N4F7 328 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 ARMC2Q8NEN0 867 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 OR2L5Q8NG80 312 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 OR4F6Q8NGB9 312 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 OR5T3Q8NGG3 340 aa15.87■□□□□ 0.13
PRKCB-210ENST00000498739 OR51Q1Q8NH59 317 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms